Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2182 atgatgaagaagaagcccATGTTGTGTGACGACGCTACCGCAGCATCATTCCGAACAACCGATAAAAAAGAAGGCGTCGCGGGATCGATACGTTCTTCGATGGATCAGAACACCGACCCTCAACAAATCGACCGCCTCTACCATAACTACCGCAAAAAGCGAAGGGTCATGCGTACCGCCGTAGCGCCACCCAAGGTCATCGACGTCGGCGACGACGATGCGGCGGCGGAGGATTTGGTTTCGCCGATGGAATCGTCGGGAGGAGAGAAATGCATTAAGAGTAGTGATACGGCGGCGTTGCACGGTTCTATATCGGTGATAGGGAGGCGGAGGGTGATGGAGGATGCAGTGAAGATCATACCTGCGCTCACGGACGGCTACGATTTCTTCGCGGTTTACGATGGTCACGGCGGGGCCACGGTGGCGAATGCGTGCCGGGAGAGGCTTCACGTGCTGGTGGCGGAGGAAGTGGCGGCAGATCGGATGGGGATAATGGATTGGCACAAGATTATGTGTTCGTGTTTTCTGAGGATGGACCAAGAAATCAATAGTATTACTTCTGCTTCAGCAGATGATAATGAATTGTTATTGCAATACAATAATATGGTGGGCTCCACCGCCCTAGTCCTCTTGGTAGGCACGCACGAGGTTGTCGTTGCCAATTGTGGAGACTCCCGTGCAGTCTTATGCCATCGTCCAGATGAAAAGGAGAGGGTGGAAACAGCAGGAGGAACCGTCATTAGTTGGGACGGAAGTCGTGTCTTGGGAATACTCGCTACATCCAGATCTATAGGGGACCAGTATCTGAAGCCATATGTGATATCAGAACCGGAGGTAAACGTGTATGAGCGAAGAGAGGAGGATGAGTTCATAGTAGTAGCAAGTGACGGGCTTTGGGATGTGATACCCAACAGTTTGGCTTGCGAGGTTGTAAGAAGATGCCTCGATGGTCCGAAGAGCAGAATTTTCAAAGAGGGCTTCATTAGGAGCACTAGTACTTCTACAGCTGAGGCTGCAGCTTTACTAGCCGAGTTGGCAATGGCTCGTGGAAGCAGAGACAATATTAGTGTTATAGTCGTCCAGCTCAACCCTTCTACTTGA 1101 0.5059 MMKKKPMLCDDATAASFRTTDKKEGVAGSIRSSMDQNTDPQQIDRLYHNYRKKRRVMRTAVAPPKVIDVGDDDAAAEDLVSPMESSGGEKCIKSSDTAALHGSISVIGRRRVMEDAVKIIPALTDGYDFFAVYDGHGGATVANACRERLHVLVAEEVAADRMGIMDWHKIMCSCFLRMDQEINSITSASADDNELLLQYNNMVGSTALVLLVGTHEVVVANCGDSRAVLCHRPDEKERVETAGGTVISWDGSRVLGILATSRSIGDQYLKPYVISEPEVNVYERREEDEFIVVASDGLWDVIPNSLACEVVRRCLDGPKSRIFKEGFIRSTSTSTAEAAALLAELAMARGSRDNISVIVVQLNPST 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2182 366 CDD PP2Cc 101 362 IPR001932 -
Sto11g2182 366 Gene3D - 88 365 IPR036457 -
Sto11g2182 366 Pfam Protein phosphatase 2C 104 355 IPR001932 -
Sto11g2182 366 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Sto11g2182 366 SUPERFAMILY PP2C-like 100 363 IPR036457 -
Sto11g2182 366 ProSiteProfiles PPM-type phosphatase domain profile. 100 362 IPR001932 -
Sto11g2182 366 SMART PP2C_SIG_2 104 362 IPR001932 -
Sto11g2182 366 PANTHER ALPHABET, ISOFORM E-RELATED 89 363 - -
Sto11g2182 366 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 89 363 - -
Sto11g2182 366 SMART PP2C_4 91 360 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2182 Sto-Chr11 20742157 20744834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2182 89 362 PP2C-type Phosphatase Gene Family AT1G07430 42.727 4.88e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2182 K14497 - gmx:100813248 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2182 11 20742157 20744834 Sto11g2182 11 20742157 20744834 ECH