Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2138 ATGGGAAATTTTAAGAGTATCTTTGATGAAGTGCCTCCATGTGTGGAAGGTCACCGATCTTCAAAGAAATACTCAAGTTTATGGCCTTTGGGTGCTGAGTTAAAGAGCTCAAAGCTTTCATCATGCCCAATTACTTCATTTCCTGCATTCTCTCTGCAGTTCCCAAGAGCATCAGAGGAGCATGTTCCCCTCTCATCTCGCCACGGTGCTGCCCCTTCTTTCTCTGGGGGGCTCTTAGTTGATACTAATCTAGACACTTCCAGTCCTGATACTTATAGACCACCTCCTGCTCCTATCCCTTTCAATGTTACCTCAAGTATCACTGAAACACCATCTGTGGCTCAAGAAATTTCTAGCGATAAGAGTAATAATGCTAATGCATCCTTGAATCCTACAAATTCTAATTCCGTTCAAGAAACAGTTGCTGGAAGCAATAATGAAGTCTTGGCTAAGTTGGAAGATCTGAAGGAATCAGAGTGTCAAGTTCAGAATGATTTAGAAATTGACTCAGCCAAGGATTCAGAGATTGAACGTACAAAGTTAGCAGAAGAGGAGGACACGTGCCCAATTTGTCTAGAAGAGTATGATGCAGAGAACCCAAAACTGACCACAAAATGTATCCATCATTTTCACCTTGCATGCATCCTGGAATGgatggaaagaaaagaaacctGTCCTGTTTGTGATGAGGATCTGGTTTTCGATCCCCCCAGTTGA 717 0.4156 MGNFKSIFDEVPPCVEGHRSSKKYSSLWPLGAELKSSKLSSCPITSFPAFSLQFPRASEEHVPLSSRHGAAPSFSGGLLVDTNLDTSSPDTYRPPPAPIPFNVTSSITETPSVAQEISSDKSNNANASLNPTNSNSVQETVAGSNNEVLAKLEDLKESECQVQNDLEIDSAKDSEIERTKLAEEEDTCPICLEEYDAENPKLTTKCIHHFHLACILEWMERKETCPVCDEDLVFDPPS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2138 238 MobiDBLite consensus disorder prediction 75 141 - -
Sto11g2138 238 SUPERFAMILY RING/U-box 180 235 - -
Sto11g2138 238 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 45 237 - -
Sto11g2138 238 SMART ring_2 188 228 IPR001841 -
Sto11g2138 238 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 163 234 IPR013083 -
Sto11g2138 238 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 45 237 - -
Sto11g2138 238 MobiDBLite consensus disorder prediction 102 141 - -
Sto11g2138 238 Pfam Ring finger domain 186 228 IPR001841 -
Sto11g2138 238 ProSiteProfiles Zinc finger RING-type profile. 188 229 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2138 Sto-Chr11 20276854 20278697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2138 48 235 C3H Transcription Factor Family AT5G41350 47.938 1.34e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2138 - - gmx:100816369 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2138 11 20276854 20278697 Sto11g2138 11 20276854 20278697 ECH