Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2124 ATGGTGGCAGAGAACGTGAAGAAACAACTTGCTTTGGCTGTGAGAAGCATCCAGTGGAGCTACGCTATATTTTGGTCTCCTTCAGCTACCCAACCAGGGGTGTTGGAGTGGGGTGAGGGATTTTACAATGGTGACATAAAGACTAGGAAAACAAATCAAGCAGTAGAACTTAATTCTGACCAAATAGGTCTGCAGAGGAGTGAGCAGTTGAGAGAGCTATTCGAGTCACTCGCAACTGCAGAAGCCACCCCACAAACTAAAAGGCCTTCGGCATCACTAACTCCTGAAGATCTTACAGACACAGAGTGGTATTACTTGGTTTGCATGTCCTTCGTATTCAATGTTGGCCAAGGGTTACCGGGACGAGTTTTGGTGAACGGCCAACCCATTTGGGTACACAATGCTCATATTGCTGAAAAGTGCATCCATTCAGGTACCATCCTGATTTTTCCTTACTTGACGATCTTTATACAAGTTAATCTAGTTACTTCTCAGTTAGGTTTAGGCATTAAGACAGTGGTGTGCTTCCCTTTTCTGGAAGGTGTTGTTGAACTAGGGACAACTGATCTGATCTCAGAAGACCTTGGTCTCATTCAACGCATCAGAACTGCTTTCTTGGATATTCTGGATGCCAAAGATCCCAAGAAGTCTGGACCTTCATTAAAAACAAGATATGACATAGATGTTGCATCTGTAGCACTTGATCATAATGCTTATGATGCTAATTACACTTCTCCCAATAGTAGTTCAAATGCATTTGAAGCGAATCAACAATTACATGAGACATATATGGTTGAAAGGATAAATGGTGGCGCTTCTCAAGTTCAAAGCTGGCAAGTTATGGATGATGAATTAAGTAACGGTGTCCACAACTCGATGAATTCTAGTGACTGTGTATCTCAAACTTTTGCTGATCCCGAAAAGATTGCCTCTGTTCCAAATGATCAAAACCAAACTGACTTTCCTTGTGCACAAGACCTTCAAGAGTGTAATAACACAAAAATTACCTCAGGGGATCTTCAAGGTGATCAATGGCATTATCAACAAGTTCTTTCTGTGCTTCTTAAAGGCTCAGACCAATTAAATATGGGATCACATTTTCAAAATAATCGCAAGGAATTCAGCTTTGTCAGATGGAACAAAGGAGAATCAATGGGTTGTCAAAGGCTAGGAGGAGGGACCTCACAAAATTTATTGAAGAAGGTATTGTTTGATGTTCCTCGGATGCACATGGATGGGCTACTTGAGTGTCAGGAAGAAAATGACTTCAAAGACAAAGAGCGAATGAAACCAGAGGTTGAAGAAATTGGCATGAACCATGTACTGTCTGAAAGAAGGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTAAGATCAATGGTCCCTTCAATTAGTAagGATGACAAAGTTTCAATACTAGATGATGCAATAGAATACCTTAGAAAGCTAgagaaaaaggtaaaagaacTGGAAGCATGCAAAGAGCTGGTTGATTTAGAGacaaaaactaaaagaaaaccTCAAGATATGGTGGAGAGGACTTCtgataattattttaacaaCAAAACTGATAATGGCAAGAAGCCAATGTTAAACAAGAGAAAGGCATGTGACATTGATGAAACATGGCGAGACGACGAGTCAGTTGCTCTAAAAGACAGTTCTACTAATAGCATTACCATCAGTATGAGCAACTCCGAAGTTCTGATCGAAATGAAGTGTCCATGGAGAGAAGGAGCAATGATGGAAATTATGCAAGCAATCAGCAGCTTCCATTTGGATTTTCATTCAGTTCAGTCATCAGAAGCTGATGGGAATCTTTATCTAACTATTAAATCTAAGTTCAGAGGACCAACTGTAGCATCAGCAAAACAGATCAGACAAGCACTTCTAAAAGCAGCTTGGAAGTGTTGA 1917 0.3949 MVAENVKKQLALAVRSIQWSYAIFWSPSATQPGVLEWGEGFYNGDIKTRKTNQAVELNSDQIGLQRSEQLRELFESLATAEATPQTKRPSASLTPEDLTDTEWYYLVCMSFVFNVGQGLPGRVLVNGQPIWVHNAHIAEKCIHSGTILIFPYLTIFIQVNLVTSQLGLGIKTVVCFPFLEGVVELGTTDLISEDLGLIQRIRTAFLDILDAKDPKKSGPSLKTRYDIDVASVALDHNAYDANYTSPNSSSNAFEANQQLHETYMVERINGGASQVQSWQVMDDELSNGVHNSMNSSDCVSQTFADPEKIASVPNDQNQTDFPCAQDLQECNNTKITSGDLQGDQWHYQQVLSVLLKGSDQLNMGSHFQNNRKEFSFVRWNKGESMGCQRLGGGTSQNLLKKVLFDVPRMHMDGLLECQEENDFKDKERMKPEVEEIGMNHVLSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIEYLRKLEKKVKELEACKELVDLETKTKRKPQDMVERTSDNYFNNKTDNGKKPMLNKRKACDIDETWRDDESVALKDSSTNSITISMSNSEVLIEMKCPWREGAMMEIMQAISSFHLDFHSVQSSEADGNLYLTIKSKFRGPTVASAKQIRQALLKAAWKC 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2124 638 PANTHER TRANSCRIPTION FACTOR TT8 4 633 - -
Sto11g2124 638 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 438 498 IPR036638 GO:0046983
Sto11g2124 638 Gene3D - 434 502 IPR036638 GO:0046983
Sto11g2124 638 SMART finulus 441 490 IPR011598 GO:0046983
Sto11g2124 638 Pfam Helix-loop-helix DNA-binding domain 439 485 IPR011598 GO:0046983
Sto11g2124 638 Coils Coil 474 501 - -
Sto11g2124 638 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 435 484 IPR011598 GO:0046983
Sto11g2124 638 PANTHER TRANSCRIPTION FACTOR EGL1 4 633 - -
Sto11g2124 638 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 7 205 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2124 Sto-Chr11 20123637 20127346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2124 2 638 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 46.039 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto11g2124 bHLH-MYC_N 2.6e-46 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2124 - - gmx:100808167 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2124 11 20123637 20127346 Sto11g2124 11 20123637 20127346 ECH