Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2115 ATGAGGTTGTCACACATTCCATCAACATCTGCTGCCAGTGTTGGGGAAATTCCATTTATCCAAGGACATCTCGAAGGAATTTCTAAGAGACTTTATCATAAGCTTTATGGAGGTTCAAATTCCACCCAATTGAGATCATTCGAGTTCCCTCACCCTGATTTCTCTGTTCAGTTAACCGAATTCCTAGTAATGGGTGTTGCAATGTGGGTAAGCTTGAATGGCCTCCCTCGTGATTCTCAAAGTCAGGTTGGAAGTGAAATCTCCTTGCTTCAAGAACGAAATAAGCCTGACCAATCATCATACCATATCCATTACCATAGTGGTCTTGAATCCATTGCCTTTGAGCATCCAATGTTAGGGATGGGTTGTGAGTTTTCCAAGTTGTCAGCCTGCTGCTCTGGTACAGAGGAAAGTGCTCCAGCGCCTGAAGCCCGCATTGATGAAAGTGAAGAGAATAGCGAGCTCACTGATGTGCCGCCATTTCATGAATACACAATAGATCAGCTTAGGAAAGCTACTTCTGGATTTGCTGTGGAAAATATAGTTTCTGAGCATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGAAAACTCGAAAACCAAATGCGAATTGCTGTCAAACGGTTCAACAGATCGGCCTGGCCTGATGCCCGGCAATTTTTGGAAGAAGCCAAGGCTGTTGGTCAGCTTCGGAACCAAAGATTGGTGAATCTACTTGGATGTTGCTCTGAAGGTGAGGAGAGGCTACTAGTTGCTGAATATATGCCCAATGATACCTTGGCAAAGCACTTGTTCCACTGGGAGACTCAGCCCATGAAATGGGCAATGCGACTGAGAGTTGCTTTGTACCTTGCCCAAGCGCTGGAATATTGTACAAATAAAGGACGTGCGCTATATCATGATCTAAATGCTTATAGAGTTCTTTTTGATGAGGAAGGAAATCCTAGACTTTCGTGCTTTGGTTTGATGAAAAACAGTCGAGATGGTAAAAGTTATAGTACGAACCTGGCATTCACCCCACCTGAGTATCTAAGGACAGGAAGAGTTACTCCAGAAAGTGTTACGTATAGCTTTGGGACCCTTTTGCTTGACCTTCTCAGTGGAAAGCATATTCCTCCAAGCCATgcACTTGACCTGATTCGAGACAGGAACCTTCAGATGCTAACAGACTCTTGTTTAGAAGGACAATTTTCAAATGACGAGGGGACTGAATTAGTACGCCTAGCCTCGCGATGTTTACAATCAGAACCACGGGAGCGTCCTAATCCAAAGTCATTGGTTACCGCTTTAATACCCCTACAGAAGGACTCTGAGGTTCCTTCTCATGTTTTGATGGGTATACCAGATGGTAATACTGCTTTACCCCTTTCACCATTTGGTGAAGCTTGTCTAAGAATGGATTTGACTGCTATCCATGAGGTCCTTGAAAAGATTGGGTATAAAGATGATGAGGGTGCTGCAACCGAGCTTTCATTCCAAATGTGGACCAACCAGATGCAGGAAACATTGAACTCAAAGAAGAAGGGCGATTCTGCTTTTCGCCATAAAGACTTCAAAACCGCAATAGATAGCTATACCCAGTTCATCGATGTTGGAACCATGGTTTCTCCAACAGTTTATGCACGCCGCAGTCTGTCTTATCTGATGAACAACATGGCAGAAGATGCACTTAAGGATGCATTGCAGGCACAAATAGTATCCCCTGTGTGGTACATTGCGTCCTATTTACAAGCTGTGGCTCTTCTTGCACTGGGCAGGGAGAATGAGGCCCAAGTGGCACTGAAAGAGGGTTCTTCACTTGAAAGCAAGAAGAACACAAATTAG 1824 0.4408 MRLSHIPSTSAASVGEIPFIQGHLEGISKRLYHKLYGGSNSTQLRSFEFPHPDFSVQLTEFLVMGVAMWVSLNGLPRDSQSQVGSEISLLQERNKPDQSSYHIHYHSGLESIAFEHPMLGMGCEFSKLSACCSGTEESAPAPEARIDESEENSELTDVPPFHEYTIDQLRKATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRSAWPDARQFLEEAKAVGQLRNQRLVNLLGCCSEGEERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTNKGRALYHDLNAYRVLFDEEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDEGTELVRLASRCLQSEPRERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGNTALPLSPFGEACLRMDLTAIHEVLEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDSAFRHKDFKTAIDSYTQFIDVGTMVSPTVYARRSLSYLMNNMAEDALKDALQAQIVSPVWYIASYLQAVALLALGRENEAQVALKEGSSLESKKNTN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2115 607 PANTHER TPR DOMAIN KINASE 121 607 - -
Sto11g2115 607 MobiDBLite consensus disorder prediction 141 155 - -
Sto11g2115 607 MobiDBLite consensus disorder prediction 136 155 - -
Sto11g2115 607 ProSiteProfiles Protein kinase domain profile. 179 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g2115 607 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 121 607 IPR045845 GO:0004672|GO:0009742
Sto11g2115 607 SUPERFAMILY TPR-like 506 601 IPR011990 GO:0005515
Sto11g2115 607 Pfam Protein tyrosine and serine/threonine kinase 192 429 IPR001245 GO:0004672|GO:0006468
Sto11g2115 607 Gene3D Tetratricopeptide repeat domain 500 607 IPR011990 GO:0005515
Sto11g2115 607 Gene3D Transferase(Phosphotransferase) domain 1 256 447 - -
Sto11g2115 607 SUPERFAMILY Protein kinase-like (PK-like) 151 439 IPR011009 -
Sto11g2115 607 Gene3D Phosphorylase Kinase; domain 1 150 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2115 Sto-Chr11 20034295 20046185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2115 149 455 Glycoside Hydrolase AT3G07070 32.836 2.39e-42 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto11g2115 PK_Tyr_Ser-Thr 3.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2115 K14500 - gmx:100819210 858.981