Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2097 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGTGGCTCTGCTTCATATTACATACATAGAGGAAATGTTTCTGGGTCTGGTTCTGGAACACAGGCTCAGGGGTTCCAAACACCCCCTGGGTTTAGACCTTTGTCAAACGTTGGCTTTCCAAATCAGTCAAATGTCCGAGGTGGTGGTTCTGTCGGTTCTGCATTTTCAGTAGAGCCTCCTCGTGCCAATTTTAGTCATGgtagtggtggtTCTTCTTCTCCTGGAGTACCTTCTTCAGGTGAgcctttgaaaaagaaaagaggaaggcCTAGAAAATATGGTCCTGATGGTCCTGTTTCTTTGGGGCTATCTCCCATGTCTGCAACTGCTACTTCTACCCCGGGATCAAGCACATCTTCACAGAAACGGAATAGAGGACGCCCACCTGGAAGTGGAAGGAAGCAACAACTAGCATCTTTAGGTGAATGGATGAACAGTTCAGCTGGAGTTGCTTTTGCACCTCATGTTATCAACATTGGAGCTGGGGAGGACATTGTAGCAAAGTTGTTGTCCATATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACCGGCACAGTTTCTTCAGTTACTCTACGCCAGCCTGCTTCTACTAGTGTCAGTTTAACTTATGAGGTTAAAACAAGTTGGTTGTTATGGGTGCTTGAAGAAACTCAATTGATATTCTATCTTTCACAGGGCCGATTTCAAATTTTATGCTTGTCTGGTTCATACTTGGTTGCTGAAGATGGTGGACCCCGCGATCGAACCGGCGGTTTGAGCGTATCCCTTTCTAGCCCTGAAGGTCGTGTTATCGGTGGTGGTGTTGCTGTGCTAATTGCTGCAAGCTCAGTGCAGGTAATAGTGTGCAGTTTTGTATATGGAAGCTCTAAGACTAAGATCAAGCAAGTGGCCTCACCCTCACCCAAAGAAGAGAATTCTGAGTCTCAGCCTCAGCAGCATCAGCATGAAGGTAATAAGTTAGGTACTCCTACTCATCATAACCCAGGATCAGCTCAAAACTACACATTGTCAGGAAGAGCCATTTGGCCAGGTGATCTGAAAAGTGCACATCATGCGCGAACCGGTATCGACTTGACACGTGGCTGA 1125 0.4542 MDGREAMAFSGGSASYYIHRGNVSGSGSGTQAQGFQTPPGFRPLSNVGFPNQSNVRGGGSVGSAFSVEPPRANFSHGSGGSSSPGVPSSGEPLKKKRGRPRKYGPDGPVSLGLSPMSATATSTPGSSTSSQKRNRGRPPGSGRKQQLASLGEWMNSSAGVAFAPHVINIGAGEDIVAKLLSISQQRPRALCIMSGTGTVSSVTLRQPASTSVSLTYEVKTSWLLWVLEETQLIFYLSQGRFQILCLSGSYLVAEDGGPRDRTGGLSVSLSSPEGRVIGGGVAVLIAASSVQVIVCSFVYGSSKTKIKQVASPSPKEENSESQPQQHQHEGNKLGTPTHHNPGSAQNYTLSGRAIWPGDLKSAHHARTGIDLTRG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2097 374 MobiDBLite consensus disorder prediction 114 136 - -
Sto11g2097 374 MobiDBLite consensus disorder prediction 18 60 - -
Sto11g2097 374 CDD DUF296 164 297 IPR005175 -
Sto11g2097 374 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 299 - -
Sto11g2097 374 MobiDBLite consensus disorder prediction 309 351 - -
Sto11g2097 374 MobiDBLite consensus disorder prediction 18 147 - -
Sto11g2097 374 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 238 374 - -
Sto11g2097 374 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 219 - -
Sto11g2097 374 ProSiteProfiles PPC domain profile profile. 156 319 IPR005175 -
Sto11g2097 374 MobiDBLite consensus disorder prediction 309 350 - -
Sto11g2097 374 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 238 374 IPR039605 GO:0003680
Sto11g2097 374 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 219 IPR039605 GO:0003680
Sto11g2097 374 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 298 IPR005175 -
Sto11g2097 374 Gene3D - 164 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2097 Sto-Chr11 19859660 19863396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2097 1 374 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 48.675 1.70e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2097 - - zju:107429897 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2097 11 19859660 19863396 Sto11g2097 11 19859660 19863396 ECH