Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2088 ATGAAATTATGTGCTTCGTTGTTGTTTATCAGTTTGATTTCTGCGTTCAACTTCGTGGCTTGTGCTGCTGTGGCGTCGAACGAAGTTTCGGCGCTTACTGCTTTCAAAGAAGCTATCTATGAAGATCCAAATCTCGTTTTGTCCAACTGGAATACAGTGGATTCATCAGATCCTTGTGATTGGAATGGTGTTTCTTGCAATACGGCCCGAGATCATGTTGTTAAGCTAAACATTTCGTGGTCGTCATTAAAGGGATTTCTAGCATCAGAATTGGGACAAATCACTTACTTGGAAGAATTGAGTTTGCACGGCAATAAATTGATCGGGATACTGCCTAAAGAGTTGGGCATGTTGAAATCTCTCAAGGTCTTGGATTTGGGGATGAATCAGCTATCAGGACCAATTCCTTCTGAGATCGGAAATTCAGTCCAATTAGTGAAAATaaACCTGCAGTCCAATGGGTTGACCGGTAGGCTACCTTCAGAGCTTGGAAATTTGAAATACCTTCAAGAACTTCGGCTGGATAGGAATAAGCTTCAAGGACCTGTTCCTGCTGGTAGCAGTCcaaatttttcttcaaatatGCGAGGAATGTATGCCTCAAATCCGAATTTAACTGGCTTCTGTCGGTCGTCTCAGTTAAAAGTTGCAGATTTTTCCTATAATTTCTTTGTTGGAAGCATCCCGAAATGCTTGGAGTATCTTCCAAGGTCAAGCTTTCAAGGGAACTGCCTCCAGATTAAGGACTTAAAGCAACGGCCTGCTGTGCAATGTGcTGGTGCCTCACCTGCCAAGAGCCATCCACTGATCAACCCAAAGCATCGACCTGCAGATTATTTGTCCAAGCATCAAAGAGCATCAAAGCCTGCTTGGCTTTTGGCTCTAGAAATAGTGACAGGAACTATGGTCGGTGCTCTCTTTCTAGTAGCTGTTGTGACTGCTCTTCAGAGGGTTAACAACAAATCATCAATCATTATTCCTTGGAAGAAATCTGCAAGCGAGAAGGAGCATACGACAGTATATATAGACTCTGAGATGTTGAAGGATGTGAGGAGGTATAGTAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATCATTGGGTCCTCTCCTGACAGTGTCCTCTACAAGGGCATCATGAAAGGTGGGCCCGAGATTGCTGTGATCTCCCTCTGCATCAAGGAAGAGCATTGGACAGGTTACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGATTTGGCAAGGTTAAACCACGAGAATACAGGGAAACTACTCGGCTATTGCCGAGAGAGCACACCATTTACAAGGATGCTGGTTTTTGAGTATGCTTCAAATGGAACACTTTATGAGCACCTACATTATGGAGAAGGATGCCAGATATCATGGACACGGCGCATGAATATCATTATAGGCATTGCTCGTGGTCTCAAGTATCTGCACACAGAAGTTGAGCCTCCATTCACTATCTCGGAGCTGAATTCTAGTGCTGTATACCTCACCGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTGGAAAGATCAGAAAAGAATTCTGGTTCTGTTGGTAGCCAAGGTGCTGTTTGTGTTCTTCCAAATTCCCTTGAGGCACGCCGTCTTGATACTCAAGGAAACATATATGCTTTTGGGGTACTTCTACTGGAGATAATCAGCGGAAGATCTCCATACTGCAAGGACAAAGGGCACATGGTGGATTGGGCGAAGGAATATCTTGAAATGCCGGAAGTAATGTCATATTTGGTGGATCCCGAATTGAAACATTTTAGATATGAAGACCTTAAAGTAATATCAGAGGTAATAAATCTCTGTATCAATCCGGACCCCGCAAGGCGTCCTGAGATGCAAGAATTATGTAGTATGCTAGAGAGCAGAATTGACACATCCATAGCTTCGGAGCTCAAGGCATCATCTTTGGCTTGGGCTGAACTCGCACTCTCATCATAA 1986 0.4345 MKLCASLLFISLISAFNFVACAAVASNEVSALTAFKEAIYEDPNLVLSNWNTVDSSDPCDWNGVSCNTARDHVVKLNISWSSLKGFLASELGQITYLEELSLHGNKLIGILPKELGMLKSLKVLDLGMNQLSGPIPSEIGNSVQLVKINLQSNGLTGRLPSELGNLKYLQELRLDRNKLQGPVPAGSSPNFSSNMRGMYASNPNLTGFCRSSQLKVADFSYNFFVGSIPKCLEYLPRSSFQGNCLQIKDLKQRPAVQCAGASPAKSHPLINPKHRPADYLSKHQRASKPAWLLALEIVTGTMVGALFLVAVVTALQRVNNKSSIIIPWKKSASEKEHTTVYIDSEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVLYKGIMKGGPEIAVISLCIKEEHWTGYLELYFQREVADLARLNHENTGKLLGYCRESTPFTRMLVFEYASNGTLYEHLHYGEGCQISWTRRMNIIIGIARGLKYLHTEVEPPFTISELNSSAVYLTEDFSPKLVDFESWKTILERSEKNSGSVGSQGAVCVLPNSLEARRLDTQGNIYAFGVLLLEIISGRSPYCKDKGHMVDWAKEYLEMPEVMSYLVDPELKHFRYEDLKVISEVINLCINPDPARRPEMQELCSMLESRIDTSIASELKASSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2088 661 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Sto11g2088 661 PANTHER PROTEIN MALE DISCOVERER 2 6 661 - -
Sto11g2088 661 Pfam Protein tyrosine and serine/threonine kinase 375 635 IPR001245 GO:0004672|GO:0006468
Sto11g2088 661 SUPERFAMILY Protein kinase-like (PK-like) 341 636 IPR011009 -
Sto11g2088 661 SUPERFAMILY L domain-like 26 236 - -
Sto11g2088 661 Gene3D Phosphorylase Kinase; domain 1 335 444 - -
Sto11g2088 661 Gene3D Ribonuclease Inhibitor 25 255 IPR032675 -
Sto11g2088 661 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Sto11g2088 661 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 661 - -
Sto11g2088 661 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2088 Sto-Chr11 19724760 19728765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2088 41 640 Receptor kinase-like Gene Family AT5G45780 29.431 4.17e-58 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sto11g2088 PK_Tyr_Ser-Thr 2.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2088 - - gmx:100792145 1055.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2088 11 19724760 19728765 Sto11g2088 11 19724760 19728765 ECH