Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2070 ATGCAtggtcttcttcctttcttctttgatCAATTTCTGATGATTCCAGCTAGTGACGGTTTCAAGGACGGCGTTAGTAGTGGTGGAGTCACGGTGGTCGGATCAGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACTGAAAACACTTCTTCAATCGGCGGATCAACGACGCTAGCGCCTCAAGGGGGTTTTCCGCCACCGCAGACGGCAGCAATGGGGGTGGCGCcggtgaagaagaagagaggtcgGCCGAGAAAGTACGGACCAGACGGCTCGGCGACGACGATGGCGCTATCGCCGATGCCGATATCTTCATCAGCTCCGCCGCCGGTGATCGATTTCTCGGCTGGGAAGCGCGGTAAAGAGCGGCCAGCTAGCTCAGTGCTTAAAACCAAATTCCAAGTGGAAAATTTAGCTCTGAGAGAGTACAACATTGAGTATGGTCTGTATCCTACGCTTGATACACTTGCACTTCACTTATCCAAATCCATCCTGAAAAGTGATTTAGCTTTATGGGTTGgtGAATGGGTTGCATGCTCTGTTGGTAATTTTACACCCCATGTCATCACTGTTAATTCTGGGGAGGACATTTCTATGAAGATAATATCATTTTCTCTGCAAGGGCCTCGAGCTATCTGCATTCTTTCAGCAAATGGAATCATATCAAGTGTCACGCTTCGTCAGCCTGATTCTTCTGGGGGCACACTGACTTATGAGGGACGGTTCGAAATTCTGTCATTATCTGGCTCATTCTTGCCGAATCAAAGTGGAGGAACCCGAAGCAGAGCGGGCGGCATGAGTGTTTCTTTAGCAAGTCCAAACGGCCGTGTGGTTGGAGGCGGAGTAGCCGGTCTTTTGGTAGCAGCAAGTCCTgttcagGTAGTGGTAGGCAGTTTCGTTGCAGGAAATCAACATGAGCAGAAGACAAAGAAACAGAAACATGAGAATATTGTATCAATTGCTTTTCCAACTGCTGATCCAATACCTAACCTCTCATCTTCAACATCCTTCCCTGGTGATAATTGGTCTTCATTACCCCAAGATAACAGGAACAATAAGCCCACTGACATTAATGTCTCTCTTCCTGCTGGGGTTCTGAGGCTAAAAGTGGTTGGGAGCAGGGCATCGCCTGTACAGTCTCGTCATGGTAGGTGTGATGAGCTGGAGCCTGGAGTTCATGGCCTGTACAGTGTCTTAGGTGGTAGTGTACAATGTTCTTGA 1224 0.4681 MHGLLPFFFDQFLMIPASDGFKDGVSSGGVTVVGSDAPSDYHVAPRTENTSSIGGSTTLAPQGGFPPPQTAAMGVAPVKKKRGRPRKYGPDGSATTMALSPMPISSSAPPPVIDFSAGKRGKERPASSVLKTKFQVENLALREYNIEYGLYPTLDTLALHLSKSILKSDLALWVGEWVACSVGNFTPHVITVNSGEDISMKIISFSLQGPRAICILSANGIISSVTLRQPDSSGGTLTYEGRFEILSLSGSFLPNQSGGTRSRAGGMSVSLASPNGRVVGGGVAGLLVAASPVQVVVGSFVAGNQHEQKTKKQKHENIVSIAFPTADPIPNLSSSTSFPGDNWSSLPQDNRNNKPTDINVSLPAGVLRLKVVGSRASPVQSRHGRCDELEPGVHGLYSVLGGSVQCS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2070 407 CDD DUF296 186 277 IPR005175 -
Sto11g2070 407 Pfam Plants and Prokaryotes Conserved (PCC) domain 187 301 IPR005175 -
Sto11g2070 407 MobiDBLite consensus disorder prediction 330 359 - -
Sto11g2070 407 ProSiteProfiles PPC domain profile profile. 182 322 IPR005175 -
Sto11g2070 407 MobiDBLite consensus disorder prediction 46 101 - -
Sto11g2070 407 MobiDBLite consensus disorder prediction 46 64 - -
Sto11g2070 407 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 174 363 - -
Sto11g2070 407 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 26 136 - -
Sto11g2070 407 Gene3D - 187 320 - -
Sto11g2070 407 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 174 363 IPR039605 GO:0003680
Sto11g2070 407 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 26 136 IPR039605 GO:0003680
Sto11g2070 407 SUPERFAMILY AF0104/ALDC/Ptd012-like 183 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2070 Sto-Chr11 19535200 19541743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2070 28 362 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 56.150 3.05e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2070 - - zju:107406129 399.438