Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2068 ATGGACCCAATTACAGCACACAGTAATCattctcttcctcctcctttccACACGCGAGATCTTCATCTGCACCATCACCACCAGTTCCACTCTCTACACCAAAACGCCAGCGACGATCAAGAGCAGAGCGGAAGCAGCGGAGGCCTCAAAAGAGACCGCGAAGATAATAATAACAACGATGCGAACGACGTCGTTGGAGGAGGAGGGGGAGGGAGCGAAGGGGGCGGCGAGATCTCTAGAAGGCCTCGCGGGAGGCCCGCTGGGTCCAAGAACAAGCCCAAGCCTCCCATCATCATCACGCGCGACAGCGCCAACGCGCTCAGGACGCACGTGATGGAAGTGGCGGACGGTTGCGACATCGTGGAGAGCGTGAGCAGCTTCGCGAGGCGGAGGCAACGAGGCGTGTGCATCATGAGTGGGACCGGGACGGTTACCAATGTTACGCTCAGGCAGCCCGCGTCGTCCGGGGCGGTCGTCACGCTCCACGGGAGGTTCGAGATACTGTCGTTGGCCGGGTCGTTCCTCCCGCCGCCTGCGCCGCCCGCGGCGTCGGGGCTGACGATATACCTGGCCGGGGGGCAGGGGCAGGTGGTGGGAGGGAGCGTGGTCGGGACGCTGGTGGCGTCCGGGCCGGTGGTCATCATGGCGGCGTCGTTCAGCAACGCGGCCTACGAGAGGCTGCCGTTGGAGGAGGAGGATCCGGCGGCAATGGCGATGcaaggcggcggcggcggcggaggaaTGGATTCccccggcggcggcggcggtggtggtcAGATGTTGGGAGACGGAAATAATGTGACGACGACGGCTCCGCTCTTCCACGGCTTGCCTCCGAATCTACTGAATTCGATTCAGATGCCGCCGTCGGAAGCTTTCTGGGCTAGTGGTGGTCGGCCGCCGTTCTGA 909 0.5787 MDPITAHSNHSLPPPFHTRDLHLHHHHQFHSLHQNASDDQEQSGSSGGLKRDREDNNNNDANDVVGGGGGGSEGGGEISRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVESVSSFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVASGPVVIMAASFSNAAYERLPLEEEDPAAMAMQGGGGGGGMDSPGGGGGGGQMLGDGNNVTTTAPLFHGLPPNLLNSIQMPPSEAFWASGGRPPF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2068 302 CDD DUF296 108 219 IPR005175 -
Sto11g2068 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 302 IPR014476 GO:0003680
Sto11g2068 302 Gene3D - 107 240 - -
Sto11g2068 302 MobiDBLite consensus disorder prediction 240 259 - -
Sto11g2068 302 MobiDBLite consensus disorder prediction 45 59 - -
Sto11g2068 302 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 221 IPR005175 -
Sto11g2068 302 PIRSF ESCAROLA 17 300 IPR014476 GO:0003680
Sto11g2068 302 ProSiteProfiles PPC domain profile profile. 104 241 IPR005175 -
Sto11g2068 302 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 236 - -
Sto11g2068 302 MobiDBLite consensus disorder prediction 26 99 - -
Sto11g2068 302 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2068 Sto-Chr11 19491168 19492076 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2068 1 302 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 57.186 1.27e-86 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2068 - - cit:102614728 352.443