Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2048 ATGTCACTATGGGGTGAGCATATAGGAAGTGTGGAAGAATGTTTCAAGGAACCAGAGAAGGTTGAATGTGTGAGACGTATAAGGTCCTTGAGTGAGATGAACTGGAGACAGTATTTAGCTGATGAGGTGACTGAAATGAAAGGTCATTTATTGAAATACCCACTTGAAGTTGATTCACAAGGGAAGGTAAGACCTCTTCCTGGCTGTGAGACATTTCCTGATGTAGGTGGAAATATTAAGGGCACTTTTACTCTCATTCAAGAAAATCTTACCATCTGA 279 0.405 MSLWGEHIGSVEECFKEPEKVECVRRIRSLSEMNWRQYLADEVTEMKGHLLKYPLEVDSQGKVRPLPGCETFPDVGGNIKGTFTLIQENLTI 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2048 92 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 1 92 - -
Sto11g2048 92 Pfam Phospholipase D C terminal 12 82 IPR024632 -
Sto11g2048 92 PANTHER PHOSPHOLIPASE D 1 92 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2048 Sto-Chr11 19311267 19311545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2048 1 92 Phospholipase D Gene Family (Wang group) AT2G42010 65.217 1.07e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2048 K01115 - cam:105851176 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g2048 11 19311267 19311545 Sto11g2048 11 19311267 19311545 ECH