Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2047 ATGGCGTCGTATCGGGAGGAGCATGAGAAGGATCAAGACGTTGACGATGGAGGAGCGTCCGACGTCAGCAACATTTCCGGCGACCCAGAACGAGACCCTCCGACCACCACCAGTCATACGACGACGTTTCAGGCGTTGCCGTTGAAGGAAGAACCAATTGACGACTCGGAATCGGACCACAAGAGTACTGATGCGCCTTCTTCGATTGGGGTTCTTCCGGTGGCCATGCCTCGGATCTTCCAGCTCACGCGGGAATTAGGTCACAAATCCGACGGCGAAACTGTACGGTGGCTTCTCGAACACGCCGAGCAGGCCATCATCGAGGCCACCGGCACCGGCACCGTTCCGGCCATCGCTGTCTCCGTCGGGGGAACGCTGAAAATCCCCACATCTTCGACGACGTCGGACACCGAAACTGCCAAGAAACGGAAACGGCCGTCTAATAGCGAGTTCGTCAATAGAAACGACGCCGTTTCGCAGTCCTCCAGATTGGCCCCAATTCAACCCGTCGTACCACAAGTGACGCCGGTAATCAACATGTCGGTGAGACCCATATCACCTTTCTTAATGACAAATATCCCGACCGGCGTAGAAGTTTTGCCGGCGGGTTGTACCGGTAGGTCTAACTCGGCGGCGATTACAAGCACGGCGGGGCCGAAGGCGGCAAAGTCCTCGACGATGGCGCCGGGTGGTAGTGATAGTGGTGGGAAGGCTCAGATGTTGAGGGATTTTTCATTGGAGATTTACAATAAGCAAGAATTAGAGTTCATGAGGAAGGGAAATTCGTAG 789 0.5539 MASYREEHEKDQDVDDGGASDVSNISGDPERDPPTTTSHTTTFQALPLKEEPIDDSESDHKSTDAPSSIGVLPVAMPRIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVSVGGTLKIPTSSTTSDTETAKKRKRPSNSEFVNRNDAVSQSSRLAPIQPVVPQVTPVINMSVRPISPFLMTNIPTGVEVLPAGCTGRSNSAAITSTAGPKAAKSSTMAPGGSDSGGKAQMLRDFSLEIYNKQELEFMRKGNS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2047 262 MobiDBLite consensus disorder prediction 129 164 - -
Sto11g2047 262 PANTHER TRANSCRIPTION FACTOR TCP9 78 168 - -
Sto11g2047 262 PANTHER TRANSCRIPTION FACTOR TCP9 174 259 - -
Sto11g2047 262 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 78 168 IPR005333 GO:0003700
Sto11g2047 262 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 174 259 IPR005333 GO:0003700
Sto11g2047 262 MobiDBLite consensus disorder prediction 215 232 - -
Sto11g2047 262 Pfam TCP family transcription factor 78 152 IPR017887 -
Sto11g2047 262 MobiDBLite consensus disorder prediction 215 239 - -
Sto11g2047 262 MobiDBLite consensus disorder prediction 1 70 - -
Sto11g2047 262 MobiDBLite consensus disorder prediction 29 45 - -
Sto11g2047 262 MobiDBLite consensus disorder prediction 1 17 - -
Sto11g2047 262 ProSiteProfiles TCP domain profile. 78 109 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2047 Sto-Chr11 19302443 19303516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2047 78 257 TCP Transcription Factor Family AT5G51910 46.154 1.66e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto11g2047 TCP 3.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2047 - - jre:108990694 222.631