Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2021 ATGTTGGCTGGGTGTTCAAGTTCTACATTGTTGTCACCAAGGCATAGCACTACTACTCGATTGAGGAGTGAAGCGTCCTGCCATTTCAATCCCTTGCCTTCTCCGATGAGCACACAGAGACTCGACCTCCCAACATCGTGCGCCTTCCCGCGCAAGGACACCAACCAGGCCCTGAGGCCCGTGGGCCTCTCCGTCcaccagcagcagcagcagcccGCGGATCCCTCCAGGCCCAGGCCCAAGCCCGCCTGTTCTCTCAAGCAGAACATCCGCCTCCCGCCGTTGGCGGCCACGACCACACAGAAGAAGAACGAGTTTTGGGAAGAGAAAGGCAACAACAAGAGCTTGAAGAAGAGGCTCGCCGATCCGGAGAATGATGATGAAGAGGATGAGTCCTTCGTCAATAACAGAGCCAAGAGGAGGAAGGATTGTTGgtttcaagaacaagatgatGATCAAGACAGAAGACTCTGCTTCGCAGCAGCGCCATGGGTGGATTCCTTCGTCACGAAGATCACGAATCTAGGCGAGAAAGAgggcaccaccaccaccaccaccaccaatgtTCCTCCACCGAAGGAAGCAGCGGCGGCTTCGGTATCCCACAACACTTCATCGGAGAGCCAAAGCATGAGCTTGAGGCTCAACGAGAACGAGTCAGAGCACGAACAGAGGAATCCGTATCACTACAACCACCACGACCACGACGGAACAGAGTTATTAGAAACAGGGGACGAAGAGAACCAGGACGAGCACCGCGGGTTCGAGCTCGTGAGCCTCCTCGCGGCCTGCGTCGACGCGATAGCCTCCAGAAACGTCGCCGCCGTGAACTGCTTCATCGCGAAATTGGGCGATCTCGCATCTCCAAGAGGGAGAACCCCCATAAGCCGAGTCTGCTCCTACTTCACCGAAGCCCTGGCTCTCCGCGTCGCAAGAATGTGGCCCCACGTCTTCCACATCACCGCACCGCGAGAGCTCGATCGAATCATGGAAGACGAATCGGGAACCGCATTGAGGCTCCTAAACCAAGTCACCCCAATCCCCAAGTTCCTCCACTTCACATCAAACGAGATCCTCCTGAGGGCGTTCGAGGGCAAAGACAGAGTCCACATCATCGACTTCGACATCAAGCAAGGCCTCCAATGGCCGAGCCTATTCCAGAGCCTAGCCTCAAGACCGAACCCTCCAGCGCACGTGAGAGTCACGGGGGTCGGGGAATCCAAGCAAGAGCTGAACGAAACAGGGGATAGACTCTCCAACTTCGCGCAAGCATTGAATCTCCCCTTCGAGTTCCACCCCGTAGTGGATAGACTCGAAGACGTGAGACTCTGGATGCTTCACGTGAAGGAACACGAAACGGTAGCCGTGAATTGCGTCTTCCAACTCCACAAAACCCTCTACGACGGATCCGGAGGAGCATTGCGTGATTTCCTGGGTCTCATCCGAAGCACAAACCCAAGCATTGTTCTAATAGCAGAGCAAGAAACAGAGCACAATGGGGTGAAACTAGAGTCCCGAGTCTGCAATTCATTGAAGTACTACTCCGCCCTCTTCGACTCCATCGACCACTGCCTTCCGCCGGACAACCCCGTGAGGGGCAAGATCGAGGAGATGTACGGCGGGGAGATAAGGAACATCGTGGCGTGCGAAGGGAGGGAGAGGGTGGAGAGGCACGAGGGGTTCGAGAAGTGGAGGAGGATGATGGAGCAAGGCGGGTTCCGAGGCGTGGGGATAAGCGAGAGGGAGATGAGGCAGAGTGAGATGCTGGTGAAGATGTATGCTTGTGGGAATTACAATGTGAGGAAGAAGgaggaaggaggaggaggaggagggataACGCTGGGATGGTTGGAGCAGCCTGTGTGTACAGTTTCCGCATGGGTACCAGTTGATGGTGGAGGAGCGGGAAGTTCATCTTCTTACTCTCAAGCATGTAGGAAAAAAGATGTTACTATtctggagtaa 1965 0.5226 MLAGCSSSTLLSPRHSTTTRLRSEASCHFNPLPSPMSTQRLDLPTSCAFPRKDTNQALRPVGLSVHQQQQQPADPSRPRPKPACSLKQNIRLPPLAATTTQKKNEFWEEKGNNKSLKKRLADPENDDEEDESFVNNRAKRRKDCWFQEQDDDQDRRLCFAAAPWVDSFVTKITNLGEKEGTTTTTTTNVPPPKEAAAASVSHNTSSESQSMSLRLNENESEHEQRNPYHYNHHDHDGTELLETGDEENQDEHRGFELVSLLAACVDAIASRNVAAVNCFIAKLGDLASPRGRTPISRVCSYFTEALALRVARMWPHVFHITAPRELDRIMEDESGTALRLLNQVTPIPKFLHFTSNEILLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRPNPPAHVRVTGVGESKQELNETGDRLSNFAQALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVFQLHKTLYDGSGGALRDFLGLIRSTNPSIVLIAEQETEHNGVKLESRVCNSLKYYSALFDSIDHCLPPDNPVRGKIEEMYGGEIRNIVACEGRERVERHEGFEKWRRMMEQGGFRGVGISEREMRQSEMLVKMYACGNYNVRKKEEGGGGGGITLGWLEQPVCTVSAWVPVDGGGAGSSSSYSQACRKKDVTILE 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2021 654 MobiDBLite consensus disorder prediction 179 215 - -
Sto11g2021 654 MobiDBLite consensus disorder prediction 63 134 - -
Sto11g2021 654 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 632 IPR005202 -
Sto11g2021 654 Pfam GRAS domain family 257 627 IPR005202 -
Sto11g2021 654 PANTHER SCARECROW-LIKE PROTEIN 28 7 632 IPR030027 -
Sto11g2021 654 ProSiteProfiles GRAS family profile. 248 628 IPR005202 -
Sto11g2021 654 MobiDBLite consensus disorder prediction 179 249 - -
Sto11g2021 654 MobiDBLite consensus disorder prediction 29 51 - -
Sto11g2021 654 MobiDBLite consensus disorder prediction 103 124 - -
Sto11g2021 654 MobiDBLite consensus disorder prediction 216 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2021 Sto-Chr11 19012952 19015284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2021 1 628 GRAS Transcription Factor Family AT1G63100 55.376 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto11g2021 GRAS 1.3e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2021 - - qsu:111999471 744.577