Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2017 TTGGAATGCATGGGTCACGCCGTTCATGTGTACAGAGCTTCATCGGGAGAGATCATAtactgGAACCATTCAGCGGAAACTCTGTATGGATGGAAGGACTATGAAATAATTGGGAAAAGAGTCGCTGACCTCCTAATCAATGAAGAATATTATGCACCTCTGCAAAAAATTCTAGAACAATTGATCAGGGGAATACCATGGTCAGGTCAGTTTCCTTTTAAGAAGAGGTCTGGCGAAGTATTTATGGCAATGGTGACAAAGTCTCCACTTTATGAGGATGGTGAACTTGCGAGTGTTATCACAGTTTCAAGTGATGCAGCCGTATTTAATGGTTTGGATAAGGAAAACCCAAGAACTTACCTTGATCAGTCTGGTGCTCATGGAGCACCTGGAGTACAGAAGTTAAACTTCAAGAGGATCCAGTGGCATCCACGACCGTTGATTGCACCAGTGCCTCAAATTGCATCATCTGTTTCCAATCTGGAAAGAAAACCTAATTTCAGACATCACCATGGAGAAAGTATATCTGTAGCGGGGGCTGCAGAGAAGGATGAATCTGCTACCGAATTTTCCAAACCTTCCAAAATTGCGGCAAGAGTCTTTGCTAAGCTGCAGAAGAGAAGTGAAAAAAGTTGGAAGGATAATGAAAGTGTCAAAAATAATGGTACAGCTGATTATTTAGCAACCAATGAAATGAAGAATAAAAATGGATCGACTGGAGGTTCAATGGCACTAAGCTCACACCAGAATGTTGCTATTAGAGACAACAAAAGAGAAAATCTCTATAAAAGCAATTCTTCTTTTGCTCAGGAGACagcagattcaaaaacttgtgGACTTACAATTTTTAGTGTTTCCAAAGATACTTCTCTTGTTACTTCCTCAGGGGAGTGCCATGAATGCTTTTGTTCTGCTATTCCTGAAGATGGATTTTTCAGATTAGGTTCCAAATGTGATCCAAACAATTTGGATCCAAAAGCAACAAATTTGGTGATAGAAGATGATGTGCAGAAACAGCAAGAAAGAGTGCAGTTACCAAGCTCCAGGGAAAGTATAGGGAGCCATGGAAGTTCATCAAGCAAAGGGGATAATGAGTCAACGGCAACTGTAGAGTGTGAAATTCAGTGGGAAGATCTTCAACTAGGAGAGGAGGTTGGACAAGGTTCTTATGCTGTTGTTTACCGTGGCATTTGGAATGGATCGGATGTTGCTGTGAAGGTTTACTTTGGCAACGAATACACAGAGGATACATTACAAGACTACAGAAAAGAAATTGATATAATGAAGAGATTGAGACATCCTAATGTATTATTGTTCATGGGAGCAGTATACTCCCAGGAAAGGCTTGCCATTGTCACAGAGTTTTTACCTAGGGGAAGCCTTTTCAAAACTCTTCACAAGAACAATCAGGCATTAGACATCAGAAGGCGTCTAAGGATGGCTCTTGATGTTGCTAGAGGTATGAATTACCTCCATCACAGAAATCCACCAATAGTGCATAGAGACTTAAAGTCTTCTAACCTTCTTGTTGATAGGAACTGGACTGTCAAGGTTGGAGACTTTGGCCTGTCAAGGTTGAAAGATGCAACTTTCGTATCTACAAAATCTGGAAGGGGCACTCCTCAGTGGATGGCCCCTGAAGTCCTACGAAATGAGCCTTCAAACGAGAAGTCTGATGTATTCAGTTTTGGTGTCATCCTCTGGGAACTGATGACTCAATCTATTCCATGgaaaaatttgaatttcttacagGTTGTTGGAGTCGTAGGCTTCATGGATAGAAGACTGGACCTGCCAGAGGGGATTGATCCCCATGTAGCATCAATCATCAATGACTGCTGGAGAAGTGGTCCAGATCAACGTCCATCATTTGAAGAGCTAATACAGAGAATGATGTCACTGATCAACAGAGTAACAGCAGTATCCATCAAGAGGATTTCAGAATCCTAA 1950 0.4072 LECMGHAVHVYRASSGEIIYWNHSAETLYGWKDYEIIGKRVADLLINEEYYAPLQKILEQLIRGIPWSGQFPFKKRSGEVFMAMVTKSPLYEDGELASVITVSSDAAVFNGLDKENPRTYLDQSGAHGAPGVQKLNFKRIQWHPRPLIAPVPQIASSVSNLERKPNFRHHHGESISVAGAAEKDESATEFSKPSKIAARVFAKLQKRSEKSWKDNESVKNNGTADYLATNEMKNKNGSTGGSMALSSHQNVAIRDNKRENLYKSNSSFAQETADSKTCGLTIFSVSKDTSLVTSSGECHECFCSAIPEDGFFRLGSKCDPNNLDPKATNLVIEDDVQKQQERVQLPSSRESIGSHGSSSSKGDNESTATVECEIQWEDLQLGEEVGQGSYAVVYRGIWNGSDVAVKVYFGNEYTEDTLQDYRKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTEFLPRGSLFKTLHKNNQALDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDRNWTVKVGDFGLSRLKDATFVSTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTQSIPWKNLNFLQVVGVVGFMDRRLDLPEGIDPHVASIINDCWRSGPDQRPSFEELIQRMMSLINRVTAVSIKRISES 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2017 649 CDD STKc_MAP3K-like 385 631 - -
Sto11g2017 649 TIGRFAM sensory_box: PAS domain S-box protein 14 104 IPR000014 -
Sto11g2017 649 SUPERFAMILY Protein kinase-like (PK-like) 370 636 IPR011009 -
Sto11g2017 649 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 176 642 - -
Sto11g2017 649 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 1 176 - -
Sto11g2017 649 MobiDBLite consensus disorder prediction 341 367 - -
Sto11g2017 649 SMART serkin_6 379 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g2017 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Sto11g2017 649 CDD PAS 16 95 IPR000014 -
Sto11g2017 649 Gene3D PAS domain 10 108 - -
Sto11g2017 649 ProSiteProfiles Protein kinase domain profile. 379 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g2017 649 PRINTS Tyrosine kinase catalytic domain signature 558 580 IPR001245 GO:0004672|GO:0006468
Sto11g2017 649 PRINTS Tyrosine kinase catalytic domain signature 492 510 IPR001245 GO:0004672|GO:0006468
Sto11g2017 649 PRINTS Tyrosine kinase catalytic domain signature 453 466 IPR001245 GO:0004672|GO:0006468
Sto11g2017 649 PRINTS Tyrosine kinase catalytic domain signature 539 549 IPR001245 GO:0004672|GO:0006468
Sto11g2017 649 PRINTS Tyrosine kinase catalytic domain signature 602 624 IPR001245 GO:0004672|GO:0006468
Sto11g2017 649 SUPERFAMILY PYP-like sensor domain (PAS domain) 3 105 IPR035965 -
Sto11g2017 649 MobiDBLite consensus disorder prediction 339 367 - -
Sto11g2017 649 ProSitePatterns Protein kinases ATP-binding region signature. 385 406 IPR017441 GO:0005524
Sto11g2017 649 ProSiteProfiles PAS repeat profile. 15 65 IPR000014 -
Sto11g2017 649 PANTHER SERINE-THREONINE PROTEIN KINASE 176 642 - -
Sto11g2017 649 PANTHER SERINE-THREONINE PROTEIN KINASE 1 176 - -
Sto11g2017 649 Gene3D Phosphorylase Kinase; domain 1 372 456 - -
Sto11g2017 649 Pfam PAS domain 14 105 IPR000014 -
Sto11g2017 649 Gene3D Transferase(Phosphotransferase) domain 1 458 643 - -
Sto11g2017 649 Pfam Protein tyrosine and serine/threonine kinase 379 630 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2017 Sto-Chr11 18962942 18968593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2017 1 637 MAP Kinase Kinase Kinase AT4G23050 49.313 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sto11g2017 PK_Tyr_Ser-Thr 2.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2017 - - gmx:100813707 929.472