Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g2015 ATGGGAAAGGCATCGAGATGGTTTCGTTCTCTCCTCGGCCTCAAAAAGCCAGACTCCTCGTCGACGACGACCATCGCCGCCGCATCGGCTCAGAAGCCGCCGAAGGATAAACGGCGGTGGAGTTTCGTCAAGTCTTACCGAGAATCCACCTATTTGAAAACCGACTCCGGCGGCCACCACCACCACGCGGCGTTCGAAGAGGAGGCGGTCCGATCGTCGTCGGGAGATGTTGTAGACGGTGTGTATCCTGACCGGCACGCGATGGCGGTGGCGGCCGCCGCCGTGGTCAGGCTTACGAGCGGCGGTAGCGGTAGGGGACCTGTAGGCATCGAGAATCGCGAAGAATGGGCGGCCGTTATGATTCAAGCCGCTTTTCGAGGCTGTTTGGCGAGGAAAGCGCTGCGAGCATTAAAAGGAGTGGTGAAGTTGCAGGCACTGGTGAAAGGTCACATTGTGAGGAAGCAGAATGCACTGAAGTTGCAAAGAATGGAAGCACTTATTCGAGCACAGGCACGAGGTCCCGCAACACCTGAGAAATCTGAAAGCCCAATCAGATACAAAAGCATGAAATTTGACCCCTCCTTATCGATCAAGAGAAATGGAACCAAATCCCATGAACAATCATGGAATCAACCCAGATCGTCACTGAGAAAAAGCAGTGTGGACGATGAAAGAAGCATCAGAATTCTCGAGGTTGATCCTGGAAAACTACACCTACCAAAACACAGAACCCTCTTTCACTCCAGTACCCATCCTATTATTCTACATGATAATTACAGCCAAAGCTTGGACTCAAAAACCCACCAATCAGGACACAGCACGTCCTCCTGTGAGGCCCAATCATACACCGGCCCACTGAAACTCGACGACGTCGTCGAGAGCCCATTCAGGGATTGTAACAACAACAATAGTGTCCCCAAGATTAGTCCTTTTACTCCAACCAGGAGTAGTGACGACTCTAGAAGCTATCTAAGTGGGTATTCTGACAACCCAAGCTATATGGCTTACACTGAGTCTTCAAAGGCCAAGGTGAGATCTGTGAGTGCCCCAAAGCAAAGGCCATCCCAATACGAGCGATCTTGTTCATCATCTAATCTGCACTTGGTTCAACCATCTGGTGGTGAGTTGAGACTGAACCCACAGAGAAGCTTCACTGCCAAAGCATATCCTGGTTCGGGTCGTTTGGACAAGTTTGGCATGCCCGTGGGGCAGGTGTACTTTGAAGCTAGTGCTAGAATTCTATAA 1245 0.5108 MGKASRWFRSLLGLKKPDSSSTTTIAAASAQKPPKDKRRWSFVKSYRESTYLKTDSGGHHHHAAFEEEAVRSSSGDVVDGVYPDRHAMAVAAAAVVRLTSGGSGRGPVGIENREEWAAVMIQAAFRGCLARKALRALKGVVKLQALVKGHIVRKQNALKLQRMEALIRAQARGPATPEKSESPIRYKSMKFDPSLSIKRNGTKSHEQSWNQPRSSLRKSSVDDERSIRILEVDPGKLHLPKHRTLFHSSTHPIILHDNYSQSLDSKTHQSGHSTSSCEAQSYTGPLKLDDVVESPFRDCNNNNSVPKISPFTPTRSSDDSRSYLSGYSDNPSYMAYTESSKAKVRSVSAPKQRPSQYERSCSSSNLHLVQPSGGELRLNPQRSFTAKAYPGSGRLDKFGMPVGQVYFEASARIL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g2015 414 PANTHER IQ-DOMAIN 5-RELATED 1 401 - -
Sto11g2015 414 SMART iq_5 113 135 IPR000048 GO:0005515
Sto11g2015 414 SMART iq_5 136 157 IPR000048 GO:0005515
Sto11g2015 414 MobiDBLite consensus disorder prediction 262 281 - -
Sto11g2015 414 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 401 - -
Sto11g2015 414 MobiDBLite consensus disorder prediction 294 324 - -
Sto11g2015 414 MobiDBLite consensus disorder prediction 195 216 - -
Sto11g2015 414 Pfam Protein of unknown function (DUF4005) 312 361 IPR025064 -
Sto11g2015 414 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Sto11g2015 414 Pfam IQ calmodulin-binding motif 138 155 IPR000048 GO:0005515
Sto11g2015 414 Pfam IQ calmodulin-binding motif 116 135 IPR000048 GO:0005515
Sto11g2015 414 MobiDBLite consensus disorder prediction 195 223 - -
Sto11g2015 414 Gene3D - 112 168 - -
Sto11g2015 414 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Sto11g2015 414 MobiDBLite consensus disorder prediction 17 38 - -
Sto11g2015 414 MobiDBLite consensus disorder prediction 296 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g2015 Sto-Chr11 18943733 18949293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g2015 115 406 IQD Protein Family AT4G23060 36.858 1.94e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g2015 - - fve:101291430 344.354