Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1990 ATGAATCCCCTTCCTTTCCTGCTTCTGCTGTTTTTTCTACTGCTTGCATTTCCTTGCCCACAACCTGTTCGAGGAAATGTGGAGCTGAGAGCTCTGATGGAGTTGAAGTCATCTCTGGATCCTGAGGGAAAGTTGCTTGATTCTTGGACCAGTGAGGGTGACCCATGTGGTGGCTCTTTCTTAGGGATAGCTTGCAATGAGCATAGGAAAGTGGCCAATATTTCCTTGCAGGGAAAGGGGCTTTCAGGATGGGTGTCTCCGGCGGTGGCTGAACTCAAGTGCTTGTCAGGTTTATACTTGCACTACAATGATCTCTCTGGGGAGATACCCAGAGAGATTTCAAATCTCACTGAATTGTTGGATCTCTATCTCAATGTGAATAATCTTTCTGGAAATATTCCTCCTCAGATTGGGATCATGCCTAGTCTCCAAGTGTTGCAGTTAGGTTATAACCAGCTGGTGGGGACTATACCTAAAGAGATGGGTTACATGAAGCAGCTTAGAGTTCTAGCTTTGCAACGTAACAACTTAACTGGTCCAATTCCTCTAAGCTTGGGGAACTTGAGTAGGCTAAGGATGCTAAATTTGAGCTTCAACAACTTCTATGGTGCAATCCCTGCAACACTTGCTACTATTGCAGATTTGGAAGTTCTAGATGTTCAAAACAATTCTCTATCAGGATTTGTTCCTTCTGCACTGAAGAGATTGAAAGACAAGTTCCAAGGTGCAAACAACTTGGGTTTATGTGGACTTGGGTTTCCTACTTTGAAAGCTTGCAACAAAGATCAAGATCAAAAGATTAACCAGCTGGACACCTCAAATCTATCGACAAAAAGTACACCTCCAAAGAATTTTCCTGAGCCTGCAAATTTCCAGTTGCATTGTAACCACACCCATTGCTCAAAATCAAGAAGGTTTCCTCAGACTGTCATCGTAGCAAGCGTTATAACAATTACCATCACAATCATCGGCGCCGGATTTTTGACTTTCATTAGATACCGCCGAAATAAGCAGAGAATTAGGAATACATCAGAATCTTCAGTAGGGCAATTTAGTCCTGACCAGCCTAAAGAGTTGTACAAAAGAAGTCCATCTCCACTTGTTAATCTTGAGTATTATAATGGATGGGATCCAATGGCTGAAGGTCAGAATGGGAGTGGATCGGCTCATGAATATCTAAACCGTTATAGGTTTAATGTGGATGAGGTTGAATCTGCAACACAGTACTTTTCTGAGGCCAACTTATTGGGTAAGAGCAAACTCTCTGCAGTCTATAAAGGAATTCTCAGAGATGGTTCTCTTGTGGCCATTAGAAGCATTAGTGTGGCATGCTGCAAAACTGAGGAAGATGAATTTGTAAGTGGGTTGAACTTGTTAACTTCACTGAGACATGAAAATCTAGTTAGACTGAGAGGTTTCTGTTGCTCAAGGAGTAGAGGTGAATGCTTTCTTATCTATGACCTTGCCCCCAAGGGTGACCTGTCCCAATATCTTGACACTGAAGATGGAAGTGGTAATAGTGTTCTTGAGTGGTCCAAGAGGGTTTCTATCATCAAGGGCATTGCAAAAGGTATTGGATATCTACACAGCAGTGAAACAAACAAACCTACAATTGTACACCAAAACATATCAGTTGAAAAAGTTGTTCTTGACCATCAGTTCAACTCATTGATCATGGATGCTGGCCTTCCTAAGCTTCTTGCAGATGATGTAGTTTTCTCAGCTCTGAAAGTAAGTGCTGCAATGGGATACCTTGCTCCGGAATATATTACTACCGGCCGGTTTACCGAGAAAAGCGACATATACGCATTCGGGGTTATTGTTCTTCAAGTTGTATCAGGGAAGAAAACAATAGGTGGTTCAATTAGGATGGCTGTTGAATCTTTCAGATTTGATGATTTTGTTGACACCAATCTGAAGGGAAGATATGCTAAATCTGAAGCAGCAATGCTTGCAAAGCTTGCAATAGCATGCACCCATGAGCTTCCTGACCAAAGGCCAACCATGGTGGAGGTGATTCAGGAGCTTAATGCATTTCCTGCACAACATTCTTCTTGA 2058 0.4232 MNPLPFLLLLFFLLLAFPCPQPVRGNVELRALMELKSSLDPEGKLLDSWTSEGDPCGGSFLGIACNEHRKVANISLQGKGLSGWVSPAVAELKCLSGLYLHYNDLSGEIPREISNLTELLDLYLNVNNLSGNIPPQIGIMPSLQVLQLGYNQLVGTIPKEMGYMKQLRVLALQRNNLTGPIPLSLGNLSRLRMLNLSFNNFYGAIPATLATIADLEVLDVQNNSLSGFVPSALKRLKDKFQGANNLGLCGLGFPTLKACNKDQDQKINQLDTSNLSTKSTPPKNFPEPANFQLHCNHTHCSKSRRFPQTVIVASVITITITIIGAGFLTFIRYRRNKQRIRNTSESSVGQFSPDQPKELYKRSPSPLVNLEYYNGWDPMAEGQNGSGSAHEYLNRYRFNVDEVESATQYFSEANLLGKSKLSAVYKGILRDGSLVAIRSISVACCKTEEDEFVSGLNLLTSLRHENLVRLRGFCCSRSRGECFLIYDLAPKGDLSQYLDTEDGSGNSVLEWSKRVSIIKGIAKGIGYLHSSETNKPTIVHQNISVEKVVLDHQFNSLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVVSGKKTIGGSIRMAVESFRFDDFVDTNLKGRYAKSEAAMLAKLAIACTHELPDQRPTMVEVIQELNAFPAQHSS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1990 685 Gene3D Transferase(Phosphotransferase) domain 1 490 685 - -
Sto11g1990 685 Pfam Leucine Rich Repeat 215 236 IPR001611 GO:0005515
Sto11g1990 685 ProSiteProfiles Protein kinase domain profile. 410 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1990 685 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Sto11g1990 685 Gene3D Ribonuclease Inhibitor 182 249 IPR032675 -
Sto11g1990 685 SUPERFAMILY Protein kinase-like (PK-like) 386 677 IPR011009 -
Sto11g1990 685 Gene3D Phosphorylase Kinase; domain 1 381 488 - -
Sto11g1990 685 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 7 679 - -
Sto11g1990 685 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 679 - -
Sto11g1990 685 Pfam Leucine rich repeat 141 201 IPR001611 GO:0005515
Sto11g1990 685 Pfam Protein tyrosine and serine/threonine kinase 414 676 IPR001245 GO:0004672|GO:0006468
Sto11g1990 685 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Sto11g1990 685 SUPERFAMILY L domain-like 28 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1990 Sto-Chr11 18686573 18690554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1990 9 524 Miscellaneous Gene Families AT4G22730 59.810 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Sto11g1990 PK_Tyr_Ser-Thr 7.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1990 - - gmx:100777169 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1990 11 18686573 18690554 Sto11g1990 11 18686573 18690554 ECH