Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1965 ATGGCGACGGAGTCTTTCAGAATGACGGCGGCTTCAGCTTCTGCTTCGTCTCTATGCAATCTCAATGGCTCTCAGAGGAAGCCAATCCCTCTTTCTCCGCTTCGCTTCAGTGGTGTTCGCCCTCGACCTTCTCGCTCTCTTActtcgtcttccctctctcacTTCTTCGGAAACGCGCGAattgcctccaaatcttcaaacCTCTCCGTTTTGCGCCACCGCAGCAGAAGAAACTTTTCTGTGTTCGCCATGGCCGCTGCTGAAGATTCAAGTCGAGCTGTTCCATTGAAAGATTATCGCAATATTGGCATCATGGCTCACATAGATGCTGGAAAGACAACTACAACCGAACGAGTTCTCTACTATACTGGAAGAAACTACAAGATTGGAGAAGTGCACGAGGGAACGGCAACAATGGACTGGATGGAACAAGAACAAGAAAGAGGGATTACCATAACTTCTGCCGCAACCACTACGTTTTGGGATAAGCACCGGATCAACATAATTGATACTCCAGGTCATGTTGACTTCACCCTTGAAGTGGAGCGGGCTCTCAGGGTTTTGGATGGAGCAATATGCTTGTTTGATAGTGTTGCTGGTGTGGAACCACAATCAGAAACTGTGTGGAGACAAGCTGATAAGTACGGGGTCCCACGAATTTGTTTTGTCAATAAGATGGACCGTCTTGGAGCAAACTTTTTCCGAACAAGGGACATGATAGTAACAAATTTGGGTGCTAAACCACTTGTACTTCAGATACCTATTGGTTCAGAAGATAACTTTCAGGGAGTTGTTGATCTCGTGAAAATGAAAGCTATAGTTTGGTCTGGTGAAGAGTTAGGTGCCAAGTTTTCTTATAAAGACATTCCAGCTGATCTTCAAGAGCTGGCTCAGGATTATCGATCTCAGATGATAGAAACTATAGTTGATTTGGATGATCAGGTTATGGAGAGCTACCTTGAAGGAATTGAACCAGATGAACAAAccaccaaaaaattaattaggcaGGGGACCATATCAGGAAAATTTGTGCCAGTATTGTGTGGCTCAGCTTTCAAAAACAAGGGGGTCCAACCATTGCTTGACGCTGTTGTGGATTATCTACCATCACCGCTTGACTTGCCACCAATGAAGGGAACTGACCCAGAAAACCCAGAAGTGACAGTAGAAAGGAAAGCAAGTGATGATGAACCATTTGCTGGACTGGCTTTCAAGATCATGAGTGATCCATTTGTAGGTTCCCTTACGTTTGTCAGGGTGTATGCTGGAAAGCTAACTGCTGGGTCTTATGTACTCAATTCAAACAAAGGGAAAAAGGAGAGAATTGGTAGACTCCTAGAAATGCATGCAAACAGCAGGGAGGATGTTAAAGTAGCTTTAACAGGTGATATTATTGCTCTTGCTGGTTTAAAAGACACCATTACAGGTGAAACATTGTGTGACTCTGATAGTCCTATTGTTCTTGAGCGTATGGACTTTCCTGACCCTGTGATAAAGGTTGCAATCGAACCAAAAACTAAAGCTGATGTTGACAAGATGGCAAATGGTTTAATTAAGCTTGCCCAAGAAGACCCTTCTTTCCACTTCTCCAGGGATGAAGAGATTAACCAGACGGTGATTGAAGGAATGGGAGAATTGCATCTTGAAATCATTGTTGACAGACTCAAGAGAGAATTTAAGGTGGAAGCTAACGTTGGTGCACCCCAAGTAAACTACAGGGAGAGCATTTCCAAAATCTCAGAAGTGAAGTATGTGCACAAGAAACAGTCAGGTGGACAAGGTCAATTTGCTGATGTTACTATTCGGTTTGAACCCATGGAGGCGGGTAGTGGATATGAGTTCAAGAGTGAGATCAAAGGAGGTGCTGTACCAAAAGAATACGTTCCAGGAGTGATGAAAGGATTGGAAGAGTGTATGAGCAATGGTGTACTTGCTGGATTTCCAGTTGTTGATGTGCGTGCAGTGCTTGTAGATGGTTCTTACCATGATGTAGATTCAAGTGTCCTGGCGTTCCAGTTGGCAGCAAGAGGAGCTTTTCGGGAGGGAATAAGAAAAGCTGGACCAAGGATGCTTGAACCTGTGATGAAAGTTGAAGTTGTTACTCCTGAAGATCATCTAGGAGATGTAATTGGTGATCTCAACTCAAGAAGAGGCCAGATCAACAGCTTTGGGGACAAACCCGGTGGCCTTAAGGTGGTTGATGCCCTCGTTCCTCTTGCTGAGATGTTTCAGTATGTCAGTACACTGAGGGGGATGACAAAGGGCCGTGCATCCTACTCAATGCAATTAGCCAAGTTTGATGTTGTGCCTCAGCACATTCAAAATCAACTCTCCTCAAAGGAGCAAGAAGTTGCTGCTTAA 2361 0.4333 MATESFRMTAASASASSLCNLNGSQRKPIPLSPLRFSGVRPRPSRSLTSSSLSHFFGNARIASKSSNLSVLRHRSRRNFSVFAMAAAEDSSRAVPLKDYRNIGIMAHIDAGKTTTTERVLYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQIPIGSEDNFQGVVDLVKMKAIVWSGEELGAKFSYKDIPADLQELAQDYRSQMIETIVDLDDQVMESYLEGIEPDEQTTKKLIRQGTISGKFVPVLCGSAFKNKGVQPLLDAVVDYLPSPLDLPPMKGTDPENPEVTVERKASDDEPFAGLAFKIMSDPFVGSLTFVRVYAGKLTAGSYVLNSNKGKKERIGRLLEMHANSREDVKVALTGDIIALAGLKDTITGETLCDSDSPIVLERMDFPDPVIKVAIEPKTKADVDKMANGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGGQGQFADVTIRFEPMEAGSGYEFKSEIKGGAVPKEYVPGVMKGLEECMSNGVLAGFPVVDVRAVLVDGSYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPVMKVEVVTPEDHLGDVIGDLNSRRGQINSFGDKPGGLKVVDALVPLAEMFQYVSTLRGMTKGRASYSMQLAKFDVVPQHIQNQLSSKEQEVAA 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1965 786 Gene3D - 574 776 IPR014721 -
Sto11g1965 786 PANTHER TRANSLATION ELONGATION FACTOR G-RELATED 75 779 - -
Sto11g1965 786 CDD EFG_mtEFG_II 399 481 - -
Sto11g1965 786 Gene3D Translation factors 382 495 - -
Sto11g1965 786 Gene3D - 90 381 IPR027417 -
Sto11g1965 786 SMART EFG_IV_2 569 687 IPR005517 GO:0005525
Sto11g1965 786 PRINTS GTP-binding elongation factor signature 101 114 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 PRINTS GTP-binding elongation factor signature 147 155 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 PRINTS GTP-binding elongation factor signature 167 177 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 PRINTS GTP-binding elongation factor signature 183 194 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 370 IPR027417 -
Sto11g1965 786 Pfam Elongation factor G, domain IV 568 686 IPR005517 GO:0005525
Sto11g1965 786 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 97 372 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 SUPERFAMILY EF-G C-terminal domain-like 692 781 IPR035647 -
Sto11g1965 786 PANTHER RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL 75 779 - -
Sto11g1965 786 CDD EFG_mtEFG1_IV 572 687 IPR005517 GO:0005525
Sto11g1965 786 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 140 155 IPR031157 -
Sto11g1965 786 SUPERFAMILY EF-G C-terminal domain-like 493 570 IPR035647 -
Sto11g1965 786 Hamap Elongation factor G [fusA]. 95 781 IPR004540 GO:0003746|GO:0005525|GO:0006414
Sto11g1965 786 CDD EFG_mtEFG_C 692 770 IPR035649 -
Sto11g1965 786 Gene3D - 693 764 - -
Sto11g1965 786 TIGRFAM EF-G: translation elongation factor G 91 781 IPR004540 GO:0003746|GO:0005525|GO:0006414
Sto11g1965 786 Pfam Elongation factor G C-terminus 690 776 IPR000640 -
Sto11g1965 786 Pfam Elongation factor Tu domain 2 413 480 IPR004161 GO:0005525
Sto11g1965 786 SMART EFG_C_a 689 777 IPR000640 -
Sto11g1965 786 CDD EF-G 101 371 - -
Sto11g1965 786 Hamap Elongation factor G, chloroplastic. 89 786 IPR030848 GO:0003746|GO:0006414|GO:0009507
Sto11g1965 786 Pfam Elongation factor Tu GTP binding domain 98 370 IPR000795 GO:0003924|GO:0005525
Sto11g1965 786 SUPERFAMILY Ribosomal protein S5 domain 2-like 568 688 IPR020568 -
Sto11g1965 786 Pfam Elongation Factor G, domain III 493 566 IPR041095 -
Sto11g1965 786 Gene3D Elongation Factor G (Translational Gtpase), domain 3 496 573 - -
Sto11g1965 786 CDD EFG_III 494 569 IPR009022 -
Sto11g1965 786 SUPERFAMILY Translation proteins 353 493 IPR009000 -
Sto11g1965 786 TIGRFAM small_GTP: small GTP-binding protein domain 99 269 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1965 Sto-Chr11 18489801 18493856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1965 98 757 Eukaryotic Initiation Factors Gene Family AT1G56070 24.816 5.38e-41 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1965 K02355 - gmx:102663021 1375.15