Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1932 ATGGCGGTCACATCATGCCTCGTCCTCAAGACAAAATTCTCTCCTATGTCGGCGGCGAAAATGATGAAGATAGCAGTTGGTACCTTGCGTGACTCTATTAACCTTGCTGCTATCAAGGCTTACATAGCAGAGACCATCGCCACTTTGGTTTTTGTCTTCGCTGGCGTCGGATCTGCCATCGCTTATGGTGAGCTTACAAAGGACGCAGCACTAGATCCAGCGGGCCTAGTGGCAGTCGCCGTGGCCCACGCATTTGCGCTGTTCGTAGGAGTGACGATGGTAGCCAACGTGTCAGGCGGCCATTTGAATCCAGCTGTCACTTTCGGATTGGCTCTTGGAGGCAACATCTCCCTCTTGACTGGTCTCTTGTACATTATTCACCAAATGCTCGGCGCCATGCTCGCATGCTACCTCCTCCAATTTGTCACCAACAAGGCTATTCCAGTTCATGCATTGGCCTCAGGGGTGGGAGCTTTTGAAGGTGTAGTGTTTGAAATTGTCATTACTTTTGGATTGGTTTGTACTGTGTATGCCACAGCAGTTGACCCCAAAAGAGGCTCCCTTGGTACCATTGCACCTATTGCAATTGGGTTCATTGTGGGCGCCAACATCTTAGCCGCCGGTCCCTTCACCGGCGGTTCGATGAACCCGGCTCGTTCATTCGGTCCGGCCTCTGTCACCAGCGATTTCTCCAGTTTCTGGATCTACTTGGTCGGCCCGATGATCGGCGGCGGCTTGGCCGGGTTGATCTATGGTCAGCTCCTCATTGGTTCATCATATGCCGCTATTCCTGAGTCTGAGAGCTACCCTTGA 813 0.5228 MAVTSCLVLKTKFSPMSAAKMMKIAVGTLRDSINLAAIKAYIAETIATLVFVFAGVGSAIAYGELTKDAALDPAGLVAVAVAHAFALFVGVTMVANVSGGHLNPAVTFGLALGGNISLLTGLLYIIHQMLGAMLACYLLQFVTNKAIPVHALASGVGAFEGVVFEIVITFGLVCTVYATAVDPKRGSLGTIAPIAIGFIVGANILAAGPFTGGSMNPARSFGPASVTSDFSSFWIYLVGPMIGGGLAGLIYGQLLIGSSYAAIPESESYP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1932 270 CDD MIP 39 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 TIGRFAM MIP: MIP family channel proteins 43 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Sto11g1932 270 PANTHER AQUAPORIN-8 21 270 IPR034294 -
Sto11g1932 270 PANTHER AQUAPORIN TIP2-2-RELATED 21 270 - -
Sto11g1932 270 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 PRINTS Major intrinsic protein family signature 164 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 PRINTS Major intrinsic protein family signature 197 219 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 PRINTS Major intrinsic protein family signature 234 254 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 Pfam Major intrinsic protein 36 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto11g1932 270 Gene3D Glycerol uptake facilitator protein. 21 262 IPR023271 -
Sto11g1932 270 SUPERFAMILY Aquaporin-like 36 256 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1932 Sto-Chr11 18065731 18072533 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1932 21 267 Major Intrinsic Protein MIP AT5G47450 68.952 8.45e-120 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1932 K09873 - csv:101203925 369.392