Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1920 ATGGCTCTTCGTCATCtccttcctctcttcctctcgtTGCTTAATTTGCTCTTACTTTTCACTTTCGTTTTCAATGCACTAACTGTTACTTCTACATTAACCTTCCACAGGTCCACGGGAGTGGGACCCATAGGTCGCCGTGTTATCACCGTTGACGTTAACGGCGGAGCCCATTTCCGGTCGGTCCAAGCCGCCGTCAATGCCGTCCCAGACAACAATAGGATGAATGTGATTATTCAAATCAGCGCCGGAtactacatAGAGAAGGTGGTGGTGCCGGAGACGAAGCCGTACGTGACGTTCGCCGGGGCGGGGAGGGACGTGACGGTGATAGAATGGCATGATCGAGCGGGTGACCTTGGGCCTAACGGACAGCAATTGCGCACTTACAGAACAGCTTCCGTCACTGTTTTTGCCAATTTCTTCTCTGCTCGAAATATCAGCTTCAAGAACACAGCGCCGGCGCCGATGCCGGGTATGGAGGGGTGGCAGGCGGCGGCGTTCCGGATATCGGGGGACAAAGCGTACTTCTCAGGATGTGGATTCTACGGCGCTCAAGACACTCTTTGCGACGACGCTGGCCGTCATTACTTCAAGGATTGCTATATCCAAGGCTCCATTGATTTTATCTTTGGCAACGGAAGGTCCTTCTATAAAGATTGCCACATCCATTCAATAGCGACGAGGTTCGGGTCCATAGCAGCCCAAGATCGCAGGAGCCCAAACGAGAAGACAGGTTTCGCATTTGTGGGCTGTAAGGTGACGGGCACGGGCCCACTCTATGTGGGCCGAGCAATGGGCCAATATTCAAGGATTGTCTATGCCTATACTTATTTCGACGACATAGTTGCGCATGGTGTTTGGGATGACTGGAATCACTCCCACAACAAGAACAAGACTGTATTCTTCGGAGTGTACAAGTGCTGGGGCCCAGGAGCCCAAACACTGGGTAGGGCCTCGTGGGCCCCTGAGCTGGATTTCGAATCGGCCCATCCATTTCTCGCCAAGAGTTTCGTCAACGGTAGACATTGGATCGCACCCTCTGACGCCTAG 1053 0.5157 MALRHLLPLFLSLLNLLLLFTFVFNALTVTSTLTFHRSTGVGPIGRRVITVDVNGGAHFRSVQAAVNAVPDNNRMNVIIQISAGYYIEKVVVPETKPYVTFAGAGRDVTVIEWHDRAGDLGPNGQQLRTYRTASVTVFANFFSARNISFKNTAPAPMPGMEGWQAAAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKDCYIQGSIDFIFGNGRSFYKDCHIHSIATRFGSIAAQDRRSPNEKTGFAFVGCKVTGTGPLYVGRAMGQYSRIVYAYTYFDDIVAHGVWDDWNHSHNKNKTVFFGVYKCWGPGAQTLGRASWAPELDFESAHPFLAKSFVNGRHWIAPSDA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1920 350 ProSitePatterns Pectinesterase signature 2. 203 212 IPR033131 -
Sto11g1920 350 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 349 - -
Sto11g1920 350 PANTHER PECTINESTERASE 68-RELATED 30 349 - -
Sto11g1920 350 SUPERFAMILY Pectin lyase-like 46 347 IPR011050 -
Sto11g1920 350 Pfam Pectinesterase 49 341 IPR000070 GO:0030599|GO:0042545
Sto11g1920 350 Gene3D - 45 349 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1920 Sto-Chr11 17923513 17925423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1920 7 350 Carbohydrate Esterase AT5G47500 71.758 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1920 - - cam:101501763 581.637