Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1916 ATGGACGAACTCAACGAAGGGCCTTCTAATAGAGAGCTCTACGCTCTGTTAAACTTGTCGCCGGAAGCTTCCGATGAGGAAATCCGAAGAGCTTATCGGCAATGGGCTCAGACGTATCACCCCGATAAATACCAAGCCCCCCACATGAAAGATATTGCTACTGAGAACTTCCAACGCATTTGTCAAGCGTACGAGGTGTTGTCAGATCCAAATAAAAGGCAAATATATGATATCTATGGTATGGAGGGTTTGGCCGCTGGTTTGGACCTTGGTTTCAAGCTGGATAAAGTTGAAGAGATAAAGGCAGAAATGGAGAAGCTACGGCGAATGAAGGAGCTAGAAAAGATGTCATCACGTTTTTTAACTTCTGGTACAATTCTCGCCAAAATGTCTGTGCCACACTTTCGAGAGGGTGATGGCATCATGAGAGGAATGGCTATGACCAGTCAAGTTCAGTCTCAGTTATCAAAACGCGACAGTGTTGCAATTGGTGGAAATTTAGCAGTTGATGAAGTTACAGGCGGTGGAGTTGCTAATactgtgtttaggcatgaaatTTCAGAAGTTTCTTCTGTTGAGTTTATGGCTTCAGTTGGTTTGCAGTCACTGATTGGGGTTCAAACATCTCGTCATTTATCTGCACACTCAGCTGCAACAATGGGTCTTTCTATGTCTTTGCAAGATTGTTCATTGAATCTTTCTAATTTGTGGACCCGCCAATTGTCAGAAACAGCAGGTGGACATATACAGCTTGCTTTGGGAACACAATCATCTATAGCGGTAGGGTGGCACAAGAAAGATAAGAGAGGGTCTGCCTCTGGAGAAGTGaagGTTGGCACACGTTCTTTTGATGTAACAGCTCTTTATTCTCATCGCTTTTCTTCCAATTCTCATGGTCGCATTGTGGGCAGATTTGGGAGTTCGGCTCTTGAGGTTGAAATTGGTGGTGGGAGGAAGATATCCAAATTCAGCTCTGTTCGCTGGTTGTACACAATAGGATATCAGGGTATTTTTTGGAGATTCGAATTGCGTCGTGGTGGCCAAAAGTTTATAATTCCTGTAAGGAATACCTTGGTTCTTTACATTTTGCTGACCAGGCATTTGAACCCTGTCATTGCTAGTGGAGCATTAGTTATTCCAGCATCTCTTTACTTTCTTCTGAAGAAATTTGTAATCAAACCCTATTATCTTAGAAGGAATAAGCAGAAGGCTGTAGAGGATTCAGAGAAAAATTCTGTTGAGGTTAGAGAAGCGAAGGCCGCCGCAGAGAAAGCTCAGCAATTACAACAAACTGTGGCTAATAGGAAAAGAAATAAGCAACTAGAAATAGGGGGACTTGTTATTACTAGAGCACTATACGGAAATCATGATGTTTTGAACAAGATAAATGCTTCAAATGAAACAAGTCATGAATCAACGTCGGACATCATAGATGTTACAGTACCTCTGAATTTCCTTGTTAGTGATTCTGGACAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGCTTTTGTGATCCGTGTCCAGGAAAGCCTAAGAAGTTGTATATAGAGTATTCTTACCGCGGTAAACAATACAAGGTCCTGGTTGGCGACTATGATGATTTATTGATACCCCAAGGCGCTCATAGGATCTAA 1647 0.4165 MDELNEGPSNRELYALLNLSPEASDEEIRRAYRQWAQTYHPDKYQAPHMKDIATENFQRICQAYEVLSDPNKRQIYDIYGMEGLAAGLDLGFKLDKVEEIKAEMEKLRRMKELEKMSSRFLTSGTILAKMSVPHFREGDGIMRGMAMTSQVQSQLSKRDSVAIGGNLAVDEVTGGGVANTVFRHEISEVSSVEFMASVGLQSLIGVQTSRHLSAHSAATMGLSMSLQDCSLNLSNLWTRQLSETAGGHIQLALGTQSSIAVGWHKKDKRGSASGEVKVGTRSFDVTALYSHRFSSNSHGRIVGRFGSSALEVEIGGGRKISKFSSVRWLYTIGYQGIFWRFELRRGGQKFIIPVRNTLVLYILLTRHLNPVIASGALVIPASLYFLLKKFVIKPYYLRRNKQKAVEDSEKNSVEVREAKAAAEKAQQLQQTVANRKRNKQLEIGGLVITRALYGNHDVLNKINASNETSHESTSDIIDVTVPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGKPKKLYIEYSYRGKQYKVLVGDYDDLLIPQGAHRI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1916 548 PANTHER CHAPERONE PROTEIN DNAJ 13 1 548 IPR042162 -
Sto11g1916 548 Coils Coil 90 117 - -
Sto11g1916 548 Pfam DnaJ-like protein C11, C-terminal 394 542 IPR024586 -
Sto11g1916 548 PRINTS DnaJ domain signature 14 32 IPR001623 -
Sto11g1916 548 PRINTS DnaJ domain signature 32 47 IPR001623 -
Sto11g1916 548 PRINTS DnaJ domain signature 52 72 IPR001623 -
Sto11g1916 548 PRINTS DnaJ domain signature 72 91 IPR001623 -
Sto11g1916 548 SUPERFAMILY Chaperone J-domain 10 91 IPR036869 -
Sto11g1916 548 Coils Coil 405 438 - -
Sto11g1916 548 Gene3D DnaJ domain 6 87 IPR036869 -
Sto11g1916 548 CDD DnaJ 12 69 IPR001623 -
Sto11g1916 548 Pfam DnaJ domain 13 77 IPR001623 -
Sto11g1916 548 SMART dnaj_3 11 72 IPR001623 -
Sto11g1916 548 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Sto11g1916 548 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1916 Sto-Chr11 17889574 17900212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1916 14 79 C2H2 Transcription Factor Family AT1G74250 45.588 1.64e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1916 K09531 - gmx:100817782 801.971