Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1907 ATGAAGAGGAAAAATAAGAACAGAGGAAGAGCATGGACTCCTGAGGAAGATGAAAAACTAGCAGAGTGCATTGAGATTCATGGGGCTAGAAGGTGGAAGACCATTGCTGTGAATTCTGGTCTTGATAGATGTGGTAAGAGTTGTAGGCTGAGGTGGTTGAACTATCTCAGACCCAACATTAAGAGGGGAAATATATCAATTGAGGAAGAGGATTTGATTCTTAGGCTTCACAAACTCATAGGAAACAGGTGGTCGTTGATAGCTGGGAGGCTTCCAGGACGAACAGACAATGAAATTAAGAATTACTGGAATTCTCATTTGTGCAAAAAAGTGAAACCCCAGAATACAGAGGATAGTGTTCTTGTGGAAGAGAATGAAGAAAAACCAGAAACTCCAATGCCTCAAGAATGCACGCCCCAGAACACAGGGGAGGATAGTGTTCTTGTGGAAGAGAATGAAGGAGCCATTCATGGAAATGGAGTTGGAAGCTCAGAAATTAGCTTTGATGTGAATGACTTCTTTGATTTCTCCACCCAAGAAGGATCATATGAGTTTGATTGGACCAAGTATCTATAA 576 0.4149 MKRKNKNRGRAWTPEEDEKLAECIEIHGARRWKTIAVNSGLDRCGKSCRLRWLNYLRPNIKRGNISIEEEDLILRLHKLIGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVKPQNTEDSVLVEENEEKPETPMPQECTPQNTGEDSVLVEENEGAIHGNGVGSSEISFDVNDFFDFSTQEGSYEFDWTKYL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1907 191 SMART sant 8 58 IPR001005 -
Sto11g1907 191 SMART sant 61 109 IPR001005 -
Sto11g1907 191 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Sto11g1907 191 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 6 189 - -
Sto11g1907 191 MobiDBLite consensus disorder prediction 115 143 - -
Sto11g1907 191 Gene3D - 10 61 - -
Sto11g1907 191 MobiDBLite consensus disorder prediction 115 131 - -
Sto11g1907 191 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 189 - -
Sto11g1907 191 CDD SANT 11 56 IPR001005 -
Sto11g1907 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 111 IPR017930 -
Sto11g1907 191 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Sto11g1907 191 CDD SANT 68 107 IPR001005 -
Sto11g1907 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 60 IPR017930 -
Sto11g1907 191 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
Sto11g1907 191 Pfam Myb-like DNA-binding domain 11 56 IPR001005 -
Sto11g1907 191 Pfam Myb-like DNA-binding domain 62 107 IPR001005 -
Sto11g1907 191 Gene3D - 65 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1907 Sto-Chr11 17823473 17825133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1907 2 111 MYB Transcription Factor Family AT4G05100 61.818 1.92e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g1907 Myb_DNA-binding 3.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1907 K09422 - gmx:100816449 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3411 6 39976523 39977285 Sto11g1907 11 17823473 17825133 CCT