Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1904 ATGACTCGGAGGTGTTCTCATTGCAGCCACAATGGGCATAACTCCAGGACTTGTCCTAACCGTGGAGTCAAGCTTTTTGGAGTTCGATTGACCGATGGGTCAATCAGGAAGAGTGCTAGTATGGGCAATCTTAGCCACTACGCTGGGTCGGGTTCCGGGTCGCATCAAACCGGGTCGAACACTCCGGGTTCTCCCGGCGAGACGCCGGATCATGGTGCTGCTGCTGACGGTTACGCCTCTGAGGATTTTGTTCCGGGGTCCTCCTCGAGTTCCCGTGAAAGGAAAAAGGGTGTTCCTTGGACTGAGGAGGAACATAGAATGTTTCTACTTGGATTGCAGAAACTAGGAAAAGGTGACTGGCGTGGAATCGCACGAAATTATGTTATATCAAGGACACCTACTCAAGTAGCCAGCCATGCTCAGAAATATTTCATCAGGCAAAGCAATGTGTCTAGGCGAAAAAGACGTTCCAGCTTGTTCGATATTGCCGCAGATGAATCGGCTGATACACCAATGGTACCGCAAGAATTCTTGCCGACCAATCAGCCAAAGGCTGAAGCAGAAGGCAGTAACCCTTTCCCTGCTCCTCCTCCAGCCCTTGAAGAAGAGTGTGAATCCATGGATTCCACCACCAATTCCAATGATGGAGAATCTGCATCCATGAAGCCAGAAAGCTCACAGCCACAGTCACAATCGCAGTCACAGTCACAACCATCATCATGCCCAGTGCTATATCCTGCATACTTCTCTCCTGTCTTCCCTTTTCCTCTTCCCTATTGGTCAGGATACATGCCAGATCAGCCAAACAAGAAGGAGGAGACACATGAAGTGCTGAAGCCAACTGCAGTACATTCCAAGAGCCCAATCAATGTTGATGAACTTGTTGGAATGTCAAAACTGAGTTTAGGAGACTCCATTGCTGACTCTGCTCCTTCCTCTCTGTCTCTGAAACTCCTAAAAGGACCCTCTAGACAGTCAGCTTTTCATGCAACTCCTCCAGCATGTGGTGGTTCTGACATGAATGGCAGTGTAATCCATGCAGTCTAA 1047 0.49 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLSHYAGSGSGSHQTGSNTPGSPGETPDHGAAADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIAADESADTPMVPQEFLPTNQPKAEAEGSNPFPAPPPALEEECESMDSTTNSNDGESASMKPESSQPQSQSQSQSQPSSCPVLYPAYFSPVFPFPLPYWSGYMPDQPNKKEETHEVLKPTAVHSKSPINVDELVGMSKLSLGDSIADSAPSSLSLKLLKGPSRQSAFHATPPACGGSDMNGSVIHAV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1904 348 PANTHER TRANSCRIPTION FACTOR KUA1 1 341 - -
Sto11g1904 348 MobiDBLite consensus disorder prediction 163 240 - -
Sto11g1904 348 SMART sant 96 146 IPR001005 -
Sto11g1904 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 147 IPR006447 GO:0003677
Sto11g1904 348 CDD SANT 99 144 IPR001005 -
Sto11g1904 348 Pfam Myb-like DNA-binding domain 99 144 IPR001005 -
Sto11g1904 348 MobiDBLite consensus disorder prediction 205 240 - -
Sto11g1904 348 PANTHER BNAC01G21010D PROTEIN 1 341 - -
Sto11g1904 348 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 148 IPR017930 -
Sto11g1904 348 ProSiteProfiles Myb-like domain profile. 92 144 IPR001005 -
Sto11g1904 348 Gene3D - 98 150 - -
Sto11g1904 348 ProSiteProfiles SANT domain profile. 100 148 IPR017884 -
Sto11g1904 348 MobiDBLite consensus disorder prediction 41 66 - -
Sto11g1904 348 MobiDBLite consensus disorder prediction 1 21 - -
Sto11g1904 348 MobiDBLite consensus disorder prediction 41 101 - -
Sto11g1904 348 SUPERFAMILY Homeodomain-like 94 149 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1904 Sto-Chr11 17758036 17761535 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto11g1904 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1904 - - cam:101491712 536.569