Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1886 ATGTACGGACAGGCCAATTACGAGTCGGATTTAGCCTTGTTGGAGTCGATTCGACGCCACTTGCTCGGAGAATCCGAGACCCGGTTACCTGCTCCGGGTTCGGCTCCGGTTTACACTCGGAGCTCCAGTTTCAGCAGTTTGTACCCGTGCTTGAGCGATAACTGGGGGGAATTGCCGCTCAAGGAAGACGATTCTGAAGACATGGTGGTTTATGGCTTCCTCCGGGACGCGGTTAACGTCGGGTGGGTCCCGTCGCTGGATGCTGCGGGTTCGCCCGAGAGCATCTCGTCGGGTTTCGCCGCGACTGTGAAATCGGAGCCCGATTTGGCGCCGGCGCAGGACTCTCCGGCGGAGGCGATCAAGCAGGAGGCGGCGCCCGCGGCGCCGCCGGCGAAGGGGAAGCATTACAGGGGAGTGAGACAGCGGCCGTGGGGGAAATTCGCGGCGGAGATTCGGGATCCGGCGAAGAACGGGGCTAGGGTTTGGCTCGGAACGTTCGAGACGGCGGAGGACGCGGCGTTGGCGTACGATCGGGCGGCGTACAGAATGAGAGGTTCGCGGGCTCTGCTGAACTTCCCGTTGAGGGTGAATTCGGGCGAACCCGACCCGGTGAGGGTGACGTCGAAGAGGTCCTCGCCGGAGCCGTCGTCCTCCTCGTTGGAGAGCGGGGCGTCGCCGAAGCGGAGGAAGAAGGTGGTGGGGCCCAACGGAAAGGGGACAGTGCAAGTGGAGTTGAAAACGGGGCAAGTGGGGAGCCAAGTGGAAACGCCGTGCTTACGTGGCGGACAGCTATTGATCGTTGTGTTTATGTGA 813 0.6224 MYGQANYESDLALLESIRRHLLGESETRLPAPGSAPVYTRSSSFSSLYPCLSDNWGELPLKEDDSEDMVVYGFLRDAVNVGWVPSLDAAGSPESISSGFAATVKSEPDLAPAQDSPAEAIKQEAAPAAPPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPEPSSSSLESGASPKRRKKVVGPNGKGTVQVELKTGQVGSQVETPCLRGGQLLIVVFM 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1886 270 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Sto11g1886 270 PRINTS Ethylene responsive element binding protein signature 159 175 IPR001471 GO:0003700|GO:0006355
Sto11g1886 270 CDD AP2 134 193 IPR001471 GO:0003700|GO:0006355
Sto11g1886 270 MobiDBLite consensus disorder prediction 197 240 - -
Sto11g1886 270 PANTHER BNAANNG21280D PROTEIN 23 246 - -
Sto11g1886 270 SUPERFAMILY DNA-binding domain 135 195 IPR016177 GO:0003677
Sto11g1886 270 Gene3D AP2/ERF domain 134 196 IPR036955 GO:0003700|GO:0006355
Sto11g1886 270 ProSiteProfiles AP2/ERF domain profile. 135 193 IPR001471 GO:0003700|GO:0006355
Sto11g1886 270 MobiDBLite consensus disorder prediction 107 138 - -
Sto11g1886 270 MobiDBLite consensus disorder prediction 209 223 - -
Sto11g1886 270 PANTHER DNA-BINDING DOMAIN 23 246 IPR044808 GO:0003700|GO:0009873
Sto11g1886 270 Pfam AP2 domain 135 185 IPR001471 GO:0003700|GO:0006355
Sto11g1886 270 SMART rav1_2 135 199 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1886 Sto-Chr11 17582109 17583626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1886 1 267 AP2-EREBP Transcription Factor Family AT4G17500 53.082 8.43e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto11g1886 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1886 K09286 - gmx:100819649 312.383