Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1882 ATGTGCCGTCAAAATTCTCCTGTACATCATTCTGCGGAAGAAGACACTGCCGCTGATGAGAGTCTTCTCATTTATTGCAAACCTGTTGAACTGTACAATATTCTCTACCGCCGTGCTCTTCATAATCCTTCATTTCTTCGGAGATCTTTGCGCTACAAAATACGAGCAAGGCGTAAAAGAAGATTGAAAGCTGGAATTGTAATCTTCAATTATAGGGACTGTTACAACATGATTCGAAAGACTGAAGTGACTGAGGACTTTTCTTGTCCATTTTGCTTGATTCAATGTGCGAGCTTTaagGGTTTGCGATTTCATCTTTCTTCATCACATGATCTATTCAactttgagttttggGTGACTGAAGACTATCAGGCAGTGAATGTCTCTGTAAAGATAGATATATTGAAATCAGagAATGTCACTGACGGAATAAATCCACAATCTCAAACCTTCTTCTTCTGGTTGGTTGTTGCAAGACCTCGACGTCGTATACACAAGGACTCTGTTCAAAATGAGAAGCGTTCCAGTGTACAGTTCCTGGAGCTGGACTCACCCATGTTGACTTCAGAAGGCATACAGAATGGTTGTCTGGAGAAGCATGATGATACCTTGTCCTGCAAAGGTGATGACTTGTCCAAGATATCTCCTAGTCAGAAGGATTTGCAGAATGGAAGACATGATGGAGGCAAATTTGGTCCTCATTATCCTGGTGGAACGGATTACTTGGAACATGTTGCATCCAGTTTTAACATTCCAGGTGTTCCAATTGCCATGCCCCAATCTTCTAGGGACCCTGAATGTAATAAATCAGTATCTAGATGTGATTCAGCTTTGCCTGCTAAGACAAGGAAGCTGAGCATGGATCGATCAGACTCAAGAAAGTATTCTCGTATGCTGCTGCAGAAAAGACAGTTCTTTCACTCTCACAGAGTTCAGCCTATGGCGCTAGAACAAGTGTTATCAGATCGGGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTTGATGTTTCCAAAGACGAAAAGCAGCTCATGCATCTCTGGAACTCTTTTGTGAGGAAGCAAAGTGTGCTGGCTGATGGTCATGTTCCCTGGGCCTGTGAGGCCTTTTCCAAACTTCATGGAAAGGAGCTGATCTCATCTTCCACTTTGTTTTGGTGTTGGAGGTTATTCATGATTAAACTTTGGAATCACGGCCTTCTTGATGCTTCCACGATGAACAACTGTAGTATAATTTTAGATAGTTTCAGAAATGAGGGATCTGATGCTGGCAAAAATTGA 1314 0.4125 MCRQNSPVHHSAEEDTAADESLLIYCKPVELYNILYRRALHNPSFLRRSLRYKIRARRKRRLKAGIVIFNYRDCYNMIRKTEVTEDFSCPFCLIQCASFKGLRFHLSSSHDLFNFEFWVTEDYQAVNVSVKIDILKSENVTDGINPQSQTFFFWLVVARPRRRIHKDSVQNEKRSSVQFLELDSPMLTSEGIQNGCLEKHDDTLSCKGDDLSKISPSQKDLQNGRHDGGKFGPHYPGGTDYLEHVASSFNIPGVPIAMPQSSRDPECNKSVSRCDSALPAKTRKLSMDRSDSRKYSRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVSKDEKQLMHLWNSFVRKQSVLADGHVPWACEAFSKLHGKELISSSTLFWCWRLFMIKLWNHGLLDASTMNNCSIILDSFRNEGSDAGKN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1882 437 Pfam VEFS-Box of polycomb protein 285 422 IPR019135 -
Sto11g1882 437 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 61 435 - -
Sto11g1882 437 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 62 - -
Sto11g1882 437 PANTHER POLYCOMB GROUP PROTEIN 61 435 - -
Sto11g1882 437 PANTHER POLYCOMB GROUP PROTEIN 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1882 Sto-Chr11 17554550 17562836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1882 1 68 C2H2 Transcription Factor Family AT5G51230 54.412 4.56e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1882 - - gmx:100807112 672.93