Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1870 ATGTCGAGTTCGTCGGAGTACTCGGAGATTTCTGAGCAGAAGCCGCCGGCCAAGTCGCCGGAGCAGTCAGCGTTCTCTCAGACTTGTAGTCTCTTGAGTCAGTACCTCAAGGAGAAGGGCGGCTTCGGAGATCTTTCCCTCGGCATCACACGCAACATCGAAGGAAGTGGGTCACCTGAAACTTCTTGTCACTCCGCAACAACCATCAACTTACTTCCAACCACGACACCACAGATGTACAGTGCAACTAAATCTGTGAGTAACGAGCCTAAAGCTTCACAGTTGACAATCTTTTATGGTGGGCAAGTGCTTGTATTTGATGATTTTCCAGCTGAGAAAGCCAAGGAGATCATGTCCTTTGCCAGCAAAGAAATCCCCCAAAGCCAGAACAAAGCTGCTTATACTTACAATTCCTGTACTCCAGTTCATACTAATGTGAATATCACCAATAGTGTTGCCAAAAATTTGGTTCAAGAGCACCCTCAAGCGCCACACAGACCTGTTATTGCTGATCTGCCAATTGCTAGGAAGGCTTCACTTCATCGGTTCTTGGAGAAGAGAAAGGATAGAATCGCTGCCAGATCACCATATCAGACCAGCAATCCCAGTAAGCCAGCTGAAGCCATGCCATGGATGGGGCTGTCTCCTAGTTCACCACAAGTCTGA 666 0.479 MSSSSEYSEISEQKPPAKSPEQSAFSQTCSLLSQYLKEKGGFGDLSLGITRNIEGSGSPETSCHSATTINLLPTTTPQMYSATKSVSNEPKASQLTIFYGGQVLVFDDFPAEKAKEIMSFASKEIPQSQNKAAYTYNSCTPVHTNVNITNSVAKNLVQEHPQAPHRPVIADLPIARKASLHRFLEKRKDRIAARSPYQTSNPSKPAEAMPWMGLSPSSPQV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1870 221 MobiDBLite consensus disorder prediction 1 25 - -
Sto11g1870 221 ProSiteProfiles Tify domain profile. 88 123 IPR010399 -
Sto11g1870 221 Pfam tify domain 89 122 IPR010399 -
Sto11g1870 221 PANTHER PROTEIN TIFY 10A 19 215 - -
Sto11g1870 221 Pfam Jas motif 173 198 IPR018467 -
Sto11g1870 221 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 215 IPR040390 -
Sto11g1870 221 MobiDBLite consensus disorder prediction 191 221 - -
Sto11g1870 221 SMART tify_2 88 123 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1870 Sto-Chr11 17436227 17437849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1870 1 215 Tify Gene Family AT1G19180 39.231 5.55e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Sto11g1870 tify 1.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1870 K13464 - gmx:100801449 259.996