Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1867 ATGGAGGAACGGTATGAggcattgaaggagcttggttCTGGGAATTTCGGAGTGGCCAGGTTGGTCAGAGATAAGAAGACGAAAGAGCTTGTGGCTGTCAAATACATTGAAAGAGGGAAAAAGATTGATGAGAATGTTCAAAGAGAGATCATTAACCACCGATCTTTAAGGCATCCAAACATCATCAAGTTCAAAGAGGTCTTGCTGACCCCAACACATTTAGCTATTGCCATGGAGTATGCTGCAGGTGGTGAACTCTTTGAAAGGATATGCAGCGCGGGCCGATTTAGTGAAGATGAGGCAAGGTTTTTCTTCCAGCAGCTAATCTCAGGAGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTGAAATTGGAGAACACTCTCTTGGATGGGAGTCCGTCGCCTCGAGTTAAAATTTGTGACTTTGGTTACTCCAAGTCTGCTTTACTTCATTCTCAACCCAAATCTACTGTTGGAACTCCTGCATACATCGCGCCGGAGGTTCTGTCACGAAAGGAGTACGATGGGAAGATTGCAGACGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTGGTTGGAGCATACCCATTTGAAGATCCTGAAGATCCTAGGAATTTCCGAAAGACAATTGGGAGAATAATGAGTGTACAGTACACCATACCGGACTATGTACGTGTTTCTGCAGAATGCAAGCATCTTCTTTCTCGTATATTTGTCGCCAATCCTGCCAAGAGGATCAGCCTCCCAGAGATAAAAGAGCACCCTTGGTTCTTGAAGAACTTGTCAAAGGAGATAATAGAATCTGAGAGAAAAGGGAGAAGTGAGGAAGCAGAGTTGAAAGAGGAAGGAAGGCAGAGTGTGGAAGAAATCATGAGGATCATACAAGAGGCATCAAGTAGTAGTAGTGGAGGGCAAGGATCCAAAGGTGAAGGAGGGCAAATGGAAGGAGGGTCAATGGAGGATATtgatgatgaatatgaagttgatGCTAGTGGTGACTATGCTGCTGAAGCTCATCACTAG 1035 0.428 MEERYEALKELGSGNFGVARLVRDKKTKELVAVKYIERGKKIDENVQREIINHRSLRHPNIIKFKEVLLTPTHLAIAMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPSPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIMSVQYTIPDYVRVSAECKHLLSRIFVANPAKRISLPEIKEHPWFLKNLSKEIIESERKGRSEEAELKEEGRQSVEEIMRIIQEASSSSSGGQGSKGEGGQMEGGSMEDIDDEYEVDASGDYAAEAHH 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1867 344 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Sto11g1867 344 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Sto11g1867 344 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1867 344 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Sto11g1867 344 MobiDBLite consensus disorder prediction 273 344 - -
Sto11g1867 344 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 330 - -
Sto11g1867 344 Coils Coil 262 282 - -
Sto11g1867 344 CDD STKc_SnRK2 4 260 - -
Sto11g1867 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Sto11g1867 344 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Sto11g1867 344 MobiDBLite consensus disorder prediction 321 335 - -
Sto11g1867 344 MobiDBLite consensus disorder prediction 296 312 - -
Sto11g1867 344 PANTHER SERINE/THREONINE KINASE 3 330 - -
Sto11g1867 344 MobiDBLite consensus disorder prediction 273 293 - -
Sto11g1867 344 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1867 344 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1867 Sto-Chr11 17427180 17430263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1867 4 269 CBL-interacting serine-threonine protein kinases AT5G25110 43.321 1.67e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Sto11g1867 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1867 K14498 - mnt:21406151 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3464 6 40305632 40309758 Sto11g1867 11 17427180 17430263 CCT
Sto11g1867 11 17427180 17430263 Sto11g1867 11 17427180 17430263 ECH