Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1859 ATGAGTTGTTTATTCTTCAAAAACAAATCTAACGCCAAGCGCGAATCCAAATCCGCTCCGGAATTGCAGAGCACCagcaggaggaagaagaagagtcaTCCGGAGCTCGATCGTGGATCCAAGTCCACCAGCGCGCTGCCGTCGCCGAGGAGCGTGACGGAGCTGTacaaggagaaggagaaggagcagAATTTCAGAGTCTTTAATCTGAAGGAGCTTATTGATGCCACGAGTGGTTTCAATAGGATGCACAAGATTGGGGAAGGAGGGTTTGGGAGCGTTTATAAAGGTACAATTAGGCCTCGAAATGGACGGGGCGATTCAGTCGTCGTTGCCATTAAAAAGCTTAACACACGTGGCTTCCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTAGGCATTGTGAATCACCCAAACCTGGTAAAACTTTTGGGATACTGCTCTATAGATGGAGAAAGAGGTATCCAAAGGTTGTTGGTGTATGAGTTCATGACCAATAGGAGCCTAGAAGATCATATTTTTAATCGGAATTTTCCCTCCTTGCCTTGGAAAACAAGATTGCAGATTATGCTTGGTGCTGCCAAAGGATTGGCTTATCTACACGAGGGATTGGAGGTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTACTATTGGATGCGGACTTCAATCCAAAGCTTTCAGATTTTGGTCTTGCTAGGGAAGGCCCAAGAGGCGATGACACTCATGTATCAACTGCGGTGGTTGGAACGCAAGGATATGCAGCCCCAGAGTATATTGAAACTGGTCATCTCAAAGCTGAGTGTGACATTTACAGTTTTGGTGTGGTACTGTATGAGATCATCACAGGAAGGCGAGCATTAGATAGAAACCGTCCAACGACAGAACAGAAGCTTCTAGATTGGGTTAAACAGTATCCTGCTGACACTAGCAGATTCAGCATGATCATCGACCCACGTCTCAGGAACAATTTTTCTCCCGGCTCAGTTCGCAAAGTTGCCAAGTTGGCAGACTCGTGTTTAAAGAAGAATCCTCAAGATAGGCCAACCATGTCTCAGATTGTGGAAAGCTTGGAGCAAGCATTGCAATGTTCAGAGACCTCTGAAACTTCTGAATCATCATCTCGATCTCCTTTGGTTCAGAAagGTGGTATACGTAAACGCGCTCAATCCGTTCCCGCAATCCGATCTACTCGTCTCCATCACCTGGCCGTACCCATCCCGATCGTACCTCTCCAACGCGTTCTCTCCCGCGAGCTGCACCCTCGCCGCCTTCGCCGCCGCCTTCACCTGCCGGACCAGTCCCTCCGGCGAGCAACCGGCGTGGTAGCCGTCACGGGATCGGGTGTTGTAGTAGCCGGCGGTGAGTTCGGCGGCGTGAGATCGGGTGTTGTAGTGCCAGTGGATGCCGGCGATTTTGGCGGAGAGTTTGGGGCCGGAGGAGTGGAATATTCGGGCGGCGGAATCGAGGATCCGGTCGGCGTGATGGAGGAGAGAGGAGGAGTACCAGGTGAGGAAGAATTGGCCGTAGTCGGAGTTCCAGGTTCCGTCCTTGCGGAAGAATCCGGTGTCCTCCGGGAATTGGTTGTACTGGCCGGAGTCGTGGGGCCCACTTCTCCCCCACTCCTTCTTCCCTATAGCTTCTGCTGCTGCTTCCAGTGA 1671 0.4913 MSCLFFKNKSNAKRESKSAPELQSTSRRKKKSHPELDRGSKSTSALPSPRSVTELYKEKEKEQNFRVFNLKELIDATSGFNRMHKIGEGGFGSVYKGTIRPRNGRGDSVVVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSIDGERGIQRLLVYEFMTNRSLEDHIFNRNFPSLPWKTRLQIMLGAAKGLAYLHEGLEVQVIYRDFKTSNVLLDADFNPKLSDFGLAREGPRGDDTHVSTAVVGTQGYAAPEYIETGHLKAECDIYSFGVVLYEIITGRRALDRNRPTTEQKLLDWVKQYPADTSRFSMIIDPRLRNNFSPGSVRKVAKLADSCLKKNPQDRPTMSQIVESLEQALQCSETSETSESSSRSPLVQKGGIRKRAQSVPAIRSTRLHHLAVPIPIVPLQRVLSRELHPRRLRRRLHLPDQSLRRATGVVAVTGSGVVVAGGEFGGVRSGVVVPVDAGDFGGEFGAGGVEYSGGGIEDPVGVMEERGGVPGEEELAVVGVPGSVLAEESGVLRELVVLAGVVGPTSPPLLLPYSFCCCFQ 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1859 556 ProSitePatterns Protein kinases ATP-binding region signature. 86 115 IPR017441 GO:0005524
Sto11g1859 556 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL20-RELATED 24 378 - -
Sto11g1859 556 PANTHER OS01G0588500 PROTEIN-RELATED 24 378 - -
Sto11g1859 556 SUPERFAMILY Protein kinase-like (PK-like) 57 362 IPR011009 -
Sto11g1859 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Sto11g1859 556 MobiDBLite consensus disorder prediction 368 383 - -
Sto11g1859 556 Pfam Protein kinase domain 81 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1859 556 ProSiteProfiles Protein kinase domain profile. 80 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1859 556 Gene3D Phosphorylase Kinase; domain 1 59 165 - -
Sto11g1859 556 Gene3D Transferase(Phosphotransferase) domain 1 166 386 - -
Sto11g1859 556 CDD STKc_IRAK 86 363 - -
Sto11g1859 556 MobiDBLite consensus disorder prediction 368 391 - -
Sto11g1859 556 MobiDBLite consensus disorder prediction 10 38 - -
Sto11g1859 556 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1859 Sto-Chr11 17352628 17357307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1859 1 361 Glycoside Hydrolase AT3G07070 42.318 1.92e-93 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto11g1859 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1859 - K00924 adu:107483795 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3472 6 40362982 40365052 Sto11g1859 11 17352628 17357307 CCT
Sto11g1859 11 17352628 17357307 Sto11g1859 11 17352628 17357307 ECH