Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1839 ATGGGTTGCTTCCACTCCAAAACCACCCATCCCAACTCTCCTGAAGATCTACCCGCCTTACCCGACTCCCACAAACCCGATCCAGGTAACGGGGATGATGCTAATGAAGGAGGATGGCAAGTCGCAGCATTTAAAGAGTATGGTCTCAGTGAACTGAGAAGGGCAACGAATGAGTTCAGCACAGATTGCATTGTGTCTGAGAGTGGTGAGAAAGCCCCCAATGTTGTCTATAAAGGGAAGCTTGAAGGCAATCTTTTGATTGGTCAGGCAGAGGCAGCTGGAGTTGGGAAGCTGAGGCACAAGAGATTGGTGAACCTAATTGGTTGTTGTGCTGAAGGAGATGAACGGCTCTTGGTGGCTGAGTACATGCCAAATGATACTTTGTCCAAACATCTTTTTCATTGGGACAAGCAACCATTGCCGTGGGAAATGCGTGTTAGAGTTGCATACCATGTTGCACAAGCTCTAGATCATTGTAGCATGGAAAACCGGAAAATATATCACGACTTAAATGCATACCGGATTCTTTTTGATGAGgATGGTGATCCTCGTTTATCAAGTTTCGGGCTTATGAAAAATAGTCGAGACGGAAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAATTTTTGCGAACAGGCAGGATTATCCCAGAGAGTGTGATCTACAGTTATGGAACAGTTCTGTTGGATCTTTTGAGTGGCAAGCATATTCCCCCGAGCCATGCTCTGGATCTGATTAGAGGGAAAAACGCATTGTTATTGATGGACTCATCCCTAGATGGGCAATATGCAAATGATGACGCTACAAAGTTGGTTGAACTTGCTTCGAAATGTCTTCAGTTTGAGGCCAGAGAAAGACCCGATATTAAGTTTCTTCTTACCTCAGTTGCTCCTCTTCAAAAGCAGAAAGAGGTGGCATCTCATGTGTTGATGGGCCTTACTAAGAATACTACAGTTCTACCAACCATGCTTTCTCCTCTTGGAAAGGCATGTGCAAGGATGGACCTTACTGCTGtgcatgatattttgttaaaAACAGGTTATAAAGATGAAGAAGGTGCTGAAAATGAGCTTTCATTCCAAGAGTGGACACAACAAGTGCAAGATATTCTCAACACAAAGAAATTTGGCGATATTGCATTTAGAGACAAGGATTTCAAAAATGCCATTGAGTATTATTCTAAGtTGGTGGTGATGATGTCTGTTCCTTCAGCAACCGTATTCGCACGACGAGCCTTCTCGTACTTGATGAATGACCAAGCCGAGCTTGCATTAAGAGACGCCATGCAAGCACAGGTGTGCATCCCTGATTGGCCGACGGCATTCTACCTGCAAGCTCTTGCTCTCTCAAAATTGGGAATGGAAACAGATGCACAAGACATGCTTAATGATGGAGCAGCCTTTGAAGCCAAGAGGTCAAACAGCTGGCGTGCTTAA 1443 0.4394 MGCFHSKTTHPNSPEDLPALPDSHKPDPGNGDDANEGGWQVAAFKEYGLSELRRATNEFSTDCIVSESGEKAPNVVYKGKLEGNLLIGQAEAAGVGKLRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLDGQYANDDATKLVELASKCLQFEARERPDIKFLLTSVAPLQKQKEVASHVLMGLTKNTTVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1839 480 MobiDBLite consensus disorder prediction 1 37 - -
Sto11g1839 480 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 479 - -
Sto11g1839 480 Gene3D Tetratricopeptide repeat domain 370 479 IPR011990 GO:0005515
Sto11g1839 480 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 479 IPR045845 GO:0004672|GO:0009742
Sto11g1839 480 Pfam Protein tyrosine and serine/threonine kinase 91 295 IPR001245 GO:0004672|GO:0006468
Sto11g1839 480 Gene3D Transferase(Phosphotransferase) domain 1 124 316 - -
Sto11g1839 480 SUPERFAMILY TPR-like 371 469 IPR011990 GO:0005515
Sto11g1839 480 Gene3D Phosphorylase Kinase; domain 1 87 122 - -
Sto11g1839 480 Gene3D Phosphorylase Kinase; domain 1 35 86 - -
Sto11g1839 480 ProSiteProfiles Protein kinase domain profile. 1 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1839 480 SUPERFAMILY Protein kinase-like (PK-like) 51 298 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1839 Sto-Chr11 17104933 17110314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1839 9 301 Glycoside Hydrolase AT3G07070 32.628 6.42e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Sto11g1839 PK_Tyr_Ser-Thr 8.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1839 K14500 - gmx:100793576 887.1