Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1833 atgagtgGGAGAATCAGAACAGAGATAGTATCTGGAAAATGCATCAAACCCACCTCACCAACACCACCACACCTTAAATTCTTCAAACTCTCTCTTCTAGACCAACTCTCCCCTAACATCCACCACAACTTTACCCTCTTCTTCCCTTCCTCCTCCGCCGCCTCTCACGGCGGCGATGATCCCCTCTCCCAATTCTCCTCCAAATCCCAACTCCTCCAAAACTCCCTCTCCCAAACGCTCACTCGCTTCTACCCTCTCGGCGGCCGCCTCCGTGACGCCGCCACCATCGACTGCAACGACCACGGCGCCATCTACATCGAAGCCCACGTCCACTCCTCTCTCCACAATTTCCTCACGAATCCAGATTTCGACACTCTCCAACACTTCCTCCCTCCCTTCGACAAGCAGCTCATGGAATTCTCATCCTCCAACTGCTCCCTCTTGTTCGTGCGTTTCACGTGGTTCGCTTGCGGTGGGACCGCCCTCAGCGTATCCCTCTCTCACAAGCTCGCCGATCTACCCGCCTTCAACGCACTCCTCCACTACTGGACCGCCACGTGTCGCGGCAGCCCACCGCCGGACGTCCCCGACTTGGGCCTCGGCCCATCTCGCCTCCCTCCGCGAGAAATCCCCGAGATTATCCCCGCATCTGTAAATATCCGCGCCGAAAAGCTCACCACGCGGAGGTTCTCATTTCCCGCGCCCAACGTGGAAGAGCTGAAGCGCAGAATCGTAACCGCTTTATTCGGCAGagataataacaacaacaaatttCAGTTTCAACCGTCGCGCGTGGAAGTGGTGCTCGCGCTGATTTGGAGATGCGCCACGTCAGCGCGGACTTCAAAAACGGGGTCGTTTATGCCGTCCGCGATGTTCCGAGCCTTGAACCTCCGTCCTCGAATGGAGCCGCCGGTGCCGAGCACGGCGATCGGAAACTTCATGTGGCCGCTGGCGGTGACGGTGGAGGAGGAATCGGAGTCGAATTTACACGTGATGGTGAAGAagatgaggaagaggatgaaGGAGTTcgtggagaaggagaagaagaagttgGAAGAGGAAGGAGGATTATTTGAAATGGCGATGGAGTATatgagagagaaggaagagatgaTGAAGGGGAAGGAGATAGTCGTATACGAGTGCTGGAGTTGGAGTAAGAACGAAATGCTTGAGGTGGATTACGGATGGGGGAATCCAGTGTGTATGTCGAATGTAGATAGGAAGATGAAGAATACAGTGACTTTGACGGAAGGAAGAGACGGAGGAGTTGAAGCTCTTGTGACTTTGGATGAGCAAGAGATGGATTTGTTTATACGACACCATGAATTGCTTCAATTTTCTCGGAAAGGCTGCATGCGAGCGAGACAAGTGTGTGTTGTTCGAGTCATAGAGTACGGATCTTCTGCACTTAGACAATGGACTTAG 1431 0.5073 MSGRIRTEIVSGKCIKPTSPTPPHLKFFKLSLLDQLSPNIHHNFTLFFPSSSAASHGGDDPLSQFSSKSQLLQNSLSQTLTRFYPLGGRLRDAATIDCNDHGAIYIEAHVHSSLHNFLTNPDFDTLQHFLPPFDKQLMEFSSSNCSLLFVRFTWFACGGTALSVSLSHKLADLPAFNALLHYWTATCRGSPPPDVPDLGLGPSRLPPREIPEIIPASVNIRAEKLTTRRFSFPAPNVEELKRRIVTALFGRDNNNNKFQFQPSRVEVVLALIWRCATSARTSKTGSFMPSAMFRALNLRPRMEPPVPSTAIGNFMWPLAVTVEEESESNLHVMVKKMRKRMKEFVEKEKKKLEEEGGLFEMAMEYMREKEEMMKGKEIVVYECWSWSKNEMLEVDYGWGNPVCMSNVDRKMKNTVTLTEGRDGGVEALVTLDEQEMDLFIRHHELLQFSRKGCMRARQVCVVRVIEYGSSALRQWT 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1833 476 PANTHER VINORINE SYNTHASE-RELATED 4 449 - -
Sto11g1833 476 Coils Coil 335 355 - -
Sto11g1833 476 Pfam Transferase family 8 445 - -
Sto11g1833 476 Gene3D - 5 213 IPR023213 -
Sto11g1833 476 PANTHER F21J9.9 4 449 - -
Sto11g1833 476 Gene3D - 222 447 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1833 Sto-Chr11 17023657 17025343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1833 5 439 Monolignol Biosynthesis Gene Families AT5G48930 22.484 1.40e-19 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1833 - - jre:108994055 404.06