Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1831 ATGAGTGGTAAGATCAGAACAGAGATAATTTCTAGGAAATGCATCAAGCCCACATCGCCCACACCCCCACACCTCAACTCCTTCAAACTCTCCCTTCTAGACCAGCTCTCCCCTAACATCCACGGAAACATAACCTTCTTCTACCCTTACACCGCCGGCAACACCACTCACTTCTGCTTTAAATCCCAACTCCTCCAGAACTCCCTCTCGGAAACGCTCACTCGTTTCTACCCTCTCGCCGGCCGCCTCCGTGACGCCACCATCGACTGCAACGATGACGGCGCCTTCTTCATCGAATCTCGAACCGACGCCACTCTCTCGGACTTCCTCGGGAAACCCGATTTCGACACCGTCGAACAGAATTTCCTCCCCACCGCCGACAACGAAACCGTGGAATCATCAAACGGCGCGATGTTCCTCGCGCGTTTCACGCTCTTCGGTTGTGGCGGCACCGCCGTGAGCCTCTGCCTCAACCATAAGATCGTCGATTTAGGGACGCTTCTCACGGTCCTCCAGAGCTGGACCGCCGCGTGTCGCGGCGGAGTTGAACAATCCCCAAACGACGCCGACTTGAACCTCGGCGCGTCCCTCTTCCCTCCGCGAGAAATTCCCGGGATGTCGGCATCCGTGAACATCCCCGCAGCCGAGAAATTCACCGCGAGACGATTCGTCTTCAGCGCGTCCAACGTGGGAGAGCTGAAGCGCAGAGTCTTACATTCCCATCAGTTCCACCCCTCGCGCGTGGAAGTGGTTCTCGCGCTGATTTGGAGGTGCGCGATGTGTGCCACGCGCGCCAAAACGGGGTCGTTTAAGCCGTCCGCCCTGTTCCAAGCCGTGAACCTCCGTTCCCGGATGGAGCCGCCGGCGCCGGAGACAACGATCGGGAACTTCGTGTGGCCGTTCGCGGTGACCGCAGAGAAAGAGGAGGAGCTAGAATTGCATTGTGCGGTGAGGAGGATGAGGGAAGGGATGAAGGAGTTTGTGGAGATGGGGGCGAAGGGGTTGAGAGAAGGAGGAGGGTTTGAGGCGGTAATGGGGTTTCTGAAGAAGAGGGGTGAGATGTTGAAGAAGGAGGAGGGGATTGTGGTGTACAAGTGTTCGAGTTGGTGTAGGTATCCGTTGCTTGAGGTGGATTTTGGGTGGGGGAAGCCAGTGTGGAGGACGAGTGTGAATAGGATAGTGAGTAATACGATTGCTTTGATGGATGTGGAAGATGGTGGAGTTGAAGCTCTGATCACTTTGGATGAGCAAGAGATGGATGTGTTTGAGCAGCATCATGAGATGCTTCACTATGCTGTGCTCAATCCTAGTATTCTTATTTGA 1323 0.5556 MSGKIRTEIISRKCIKPTSPTPPHLNSFKLSLLDQLSPNIHGNITFFYPYTAGNTTHFCFKSQLLQNSLSETLTRFYPLAGRLRDATIDCNDDGAFFIESRTDATLSDFLGKPDFDTVEQNFLPTADNETVESSNGAMFLARFTLFGCGGTAVSLCLNHKIVDLGTLLTVLQSWTAACRGGVEQSPNDADLNLGASLFPPREIPGMSASVNIPAAEKFTARRFVFSASNVGELKRRVLHSHQFHPSRVEVVLALIWRCAMCATRAKTGSFKPSALFQAVNLRSRMEPPAPETTIGNFVWPFAVTAEKEEELELHCAVRRMREGMKEFVEMGAKGLREGGGFEAVMGFLKKRGEMLKKEEGIVVYKCSSWCRYPLLEVDFGWGKPVWRTSVNRIVSNTIALMDVEDGGVEALITLDEQEMDVFEQHHEMLHYAVLNPSILI 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1831 440 Pfam Transferase family 8 428 - -
Sto11g1831 440 PANTHER F21J9.9 4 439 - -
Sto11g1831 440 PANTHER VINORINE SYNTHASE-RELATED 4 439 - -
Sto11g1831 440 Gene3D - 5 205 IPR023213 -
Sto11g1831 440 Gene3D - 215 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1831 Sto-Chr11 17000553 17001947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1831 5 424 Monolignol Biosynthesis Gene Families AT5G48930 24.565 6.30e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1831 - - jre:108994055 524.242