Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1829 ATGGAAGGGGCATCAAAGTCACTTCCTCCAGGTTTTCGTTTCCACCCAACAGATGAAGAACTGATAGGATACTATCTCAAAAGAAAAGTCCAAGGCCTTCAATTTGAGCTTCAACTCATCCCCCTCCTTGATTTTTACAAATTCGATCCTTGGGACTTGCCTGAGAAATCGTTCCTGCCAAGAAGAGACATGGAATGGTTTTTCTTCAGTTCAAGGGATCGAAAGTACCCAAATGGTTCAAGAACAAACAGAGCTACCAAAGCTGGCTACTGGAAAGCTACCGGAAAAGACAGAACGATAGTCTGCCAATCCGGCGTCACCGGCTACCGGAAAACCCTTGTTTTCTATCGAGGAAGGGCCCCTTTAGGAGATCGAACTGATTGGGTCATGCATGAGTATCGCCTTTGTGATCATCTTCAACCATCATCACCAACCTTTCAGGGTGGTTTTGCATTATGCCGAGTTatgaaaaagaatgagaaagCAAATGGTTCGTCACATGGTGGAGAAGACAAGGCCAAAACATCAGGTggcaatgaagaagaagaagaagcctcAATGAGGATCTCAAGTGGCCCTGCAAAGCCACCCATGACGGGTGCCAATGGGGGCCCAATGAGAAGCCCATCGGCCCCGAATTTAAAAGAGGAAGGCGTCGAAAGTATCGTAGTAGTCGTCAGTGCTTCTGTAGCCTTCAGGATTGAATGCGCCAAACTTGAAGGAGTTGTTTGTGTAGCCTATGATGACGCATGGCCCCTTGAAGTCGCTGCAATCGTGGAAATTGGTGGCGCTGAAGCCGTCAATTGTGGCCTTGTAGCAGCACTTGAGTTCCCTACCTTGATCGTGTAA 849 0.4535 MEGASKSLPPGFRFHPTDEELIGYYLKRKVQGLQFELQLIPLLDFYKFDPWDLPEKSFLPRRDMEWFFFSSRDRKYPNGSRTNRATKAGYWKATGKDRTIVCQSGVTGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDHLQPSSPTFQGGFALCRVMKKNEKANGSSHGGEDKAKTSGGNEEEEEASMRISSGPAKPPMTGANGGPMRSPSAPNLKEEGVESIVVVVSASVAFRIECAKLEGVVCVAYDDAWPLEVAAIVEIGGAEAVNCGLVAALEFPTLIV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1829 282 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Sto11g1829 282 Pfam No apical meristem (NAM) protein 9 135 IPR003441 GO:0003677|GO:0006355
Sto11g1829 282 MobiDBLite consensus disorder prediction 161 211 - -
Sto11g1829 282 MobiDBLite consensus disorder prediction 161 188 - -
Sto11g1829 282 SUPERFAMILY NAC domain 6 158 IPR036093 GO:0003677|GO:0006355
Sto11g1829 282 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 176 - -
Sto11g1829 282 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Sto11g1829 282 PANTHER NAC DOMAIN-CONTAINING PROTEIN 96 5 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1829 Sto-Chr11 16979408 16982958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1829 5 160 NAC Transcription Factor Family AT4G17980 74.534 7.11e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto11g1829 NAM 3.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1829 - - csin:114284776 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1829 11 16979408 16982958 Sto11g1829 11 16979408 16982958 ECH