Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1825 ATGGGTTTCACTAAAAGGGGAAAGCACATCCGAGCGACTCGGAGTCATCGACCACCCAAAGCCGAAACGGATTCTGGTGACAAAACTCCCGTCTCGAAATCTATACTGGAATCTAGCCTCAAGGAGTTCAAAAACCAAATGTTTCTCAACGATTCATCTCCAAATCCAAATTCTAGCTCTCCCTTTAACCCTAGCCGAGAGGGAACCGGCTTCCGTAACTGCACCGAAGAACAATTAGAAGCAATTTTATTAGAATCCTTGGAATCTCAATACAATGAAGCTCTATCGAAGCTTGTTCAAATGGGCTATGACAAGGATGTTGCTCTCAGAGCAATATTGCGAAATGGACATTGTTATGGTGATAAGGATGTGTTAAACAATATATTGCATAACACATTGGCTTATTTGAATAGTAATGATAGTAGTGCAAGTAATGATGAAAGTCTGGATGATTCTGAACCTATTTTCTCAGACTTAAGGCAGCTGGTGGAGCAGTCTCTGGCTGCTATGCTCGGTTTGGTGAAACGAATCAAGCCAAATTTGAGTAGAGGAGATGTCCTGTGGTGTTTGGTTATGAATGATCTTCATGTATTACGGGCGAGCTCTGTGGAATCTCTAGTGCTTCCAGTTCAAGGAGTTGCTTGCCCTGCTCCTAGTACTGCTGAGGCTGTTAGTAGGTTTCATGGAGGAGGCTCAGATCTTCCCATGAGTGGGTTCTCCTCTCACGGTTCAAATCTGACTTTACAAAGGCCTATCGAATTTCCCAAGAGGCTTGATCTTTCTCCTTCAACGAAGCTTTTATTGAAAAGAAATGTTGCAAGGTTTGTTGCTGGTTTCAGGGCAAATTCAGAACAATTGCAGACACGAGCTATGTCCTGTTCGAGTTTGGATTCTCCACCTGTATCTGGGAATGATGTCCTTGCTGAGCAGTCTGGGGATTCTCAGAATCTGAATAATCAAGATTCTGTGAACTCAATGGTTAGTAAATTTTGTGATCTAAATATTGATGAGAGTTTGGAATTTTTTAAAGGAGATCATAAGAAGGATGAGGTGAATCAGGCGATAGTCAATATGCTTAATCAGATTAAGGAGCTCGAGAATGAGGTAAAGAAACGAAAAAAATGGGCCCATGAGAAGGCAGTGCAAAGTGCAAGGAGTCTAAGTAATGGTACAATTGAACTGAAACTTTTGAGGATGGAAAAAGAGGAGACTCAGAGATTGATGAAAGGGAAACATGCAATTGAGGACACAACCATGAAAAGACTCTCAGAGATGGAGAATGCTTTGAGAAGGACAATTGGCCAAGTGAACCGTGCAAATTCAGCTGTGAGGCGACTTGAGGCAGAGAATGCAGAAATCAGAGCAGATTTGGAGGCTTCTAAATTAAGTGCTTCAGAATCAGACGCAGCTTGCTCGAACATtgtaaaaagagagaaaaagtacaTGAAGAAGATTCTTGCTTGGGAAAATTTGAAAGCTCAACTACAACAGGAGATTTctgatgaaaaagagaagatatTGCAGATACAGGAAGAGCTGGTCCGGATTAAAAAGTGTCAGAAAGATGCAGAGGTTAAGTGGAGGGAGGAGTTGAAGGCTAAGGAAGAAGCATTTGGCCTAGTTGGGGAGGAGCGACGCTCCAAGGAAGCCGTTGAGGCTGATAATAAGAGGAAGCTTGAGGTGTTGCGGCTCAAGATAGAGATAGATTTCCAGTGCCACATAGATGATCTCTCAAGACTTGAGCAAGAGCTGTCACGCCTCAGAGCTTCTTCCGAATCAAATACTTCGCTTGCAATCAACAGTGACAGGGAATGCGTAATATGCATGAAAGATGAAGTGTCTGTTGTTTTCTTGCCTTGTGCTCACCAAGTTATGTGTGCTAGTTGCAGTGATGCGTATGGGGGAAAGGCTAAAGCTGCTTGTCCTTGCTGCCATGTTCCCATTGAGCAGAGGATCCGCGTATTCGGGGCGAGTTCTACCTGA 1983 0.4251 MGFTKRGKHIRATRSHRPPKAETDSGDKTPVSKSILESSLKEFKNQMFLNDSSPNPNSSSPFNPSREGTGFRNCTEEQLEAILLESLESQYNEALSKLVQMGYDKDVALRAILRNGHCYGDKDVLNNILHNTLAYLNSNDSSASNDESLDDSEPIFSDLRQLVEQSLAAMLGLVKRIKPNLSRGDVLWCLVMNDLHVLRASSVESLVLPVQGVACPAPSTAEAVSRFHGGGSDLPMSGFSSHGSNLTLQRPIEFPKRLDLSPSTKLLLKRNVARFVAGFRANSEQLQTRAMSCSSLDSPPVSGNDVLAEQSGDSQNLNNQDSVNSMVSKFCDLNIDESLEFFKGDHKKDEVNQAIVNMLNQIKELENEVKKRKKWAHEKAVQSARSLSNGTIELKLLRMEKEETQRLMKGKHAIEDTTMKRLSEMENALRRTIGQVNRANSAVRRLEAENAEIRADLEASKLSASESDAACSNIVKREKKYMKKILAWENLKAQLQQEISDEKEKILQIQEELVRIKKCQKDAEVKWREELKAKEEAFGLVGEERRSKEAVEADNKRKLEVLRLKIEIDFQCHIDDLSRLEQELSRLRASSESNTSLAINSDRECVICMKDEVSVVFLPCAHQVMCASCSDAYGGKAKAACPCCHVPIEQRIRVFGASST 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1825 660 Coils Coil 478 512 - -
Sto11g1825 660 Pfam Zinc finger, C3HC4 type (RING finger) 602 650 - -
Sto11g1825 660 MobiDBLite consensus disorder prediction 1 15 - -
Sto11g1825 660 Coils Coil 429 463 - -
Sto11g1825 660 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 580 656 IPR013083 -
Sto11g1825 660 MobiDBLite consensus disorder prediction 1 33 - -
Sto11g1825 660 MobiDBLite consensus disorder prediction 290 321 - -
Sto11g1825 660 PANTHER OS05G0141500 PROTEIN 1 658 IPR046934 -
Sto11g1825 660 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 658 - -
Sto11g1825 660 Pfam Family of unknown function (DUF6592) 87 202 IPR046527 -
Sto11g1825 660 MobiDBLite consensus disorder prediction 47 71 - -
Sto11g1825 660 Coils Coil 570 590 - -
Sto11g1825 660 SUPERFAMILY RING/U-box 596 651 - -
Sto11g1825 660 ProSiteProfiles Zinc finger RING-type profile. 605 645 IPR001841 -
Sto11g1825 660 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 86 131 IPR015940 -
Sto11g1825 660 SMART ring_2 605 644 IPR001841 -
Sto11g1825 660 Coils Coil 348 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1825 Sto-Chr11 16952390 16955462 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1825 580 655 C3H Transcription Factor Family AT1G73950 37.209 4.33e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1825 - - gmx:100777787 744.577