Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1807 TTGACGATAGGTAATTATAATGCCGATTTTCATAGAAAAGATGCATCTTGTAGTTTGGCTTCCATTGATTTCTCTCCTGCATTTGGAAAGAATGTGAATGAGatacttgttttaattttttcttttgctagCACTCCTTTTGAACCAGATAATGGCAATTACCATGATGTTCAAAACTTTGTTGAAGAACTTCCAATGGCAGGAGTAGTTCTTCCAAACAGTTTGGATCTGTCAGACATTTCTTTCCTGAAATATTTTTGCAATTCTGCTATTTCACTTAAGGGAGAGCCTTCTGTGTGCTCCGGTGAACAAGTGGAATCATCACTAGCAACGGTTAGTCTTGCATCCTGTAAGAAGCATCTACAGAAGTCTGAGTCTGTAATTGATCACAACACTATGCAAGAATCTCTGGAATCTCAGCCTGAAAACCCTAGGGGTGCATCAGACTTATTGGATGATGAGGTTAGAGTTTGTGATACCTGTGGAGATTTAGGGCGAGAGGAATTACTTGCTTTCTGTGAAAAGTGTACTGATGGGGCAGCACACATTTATTGTATGCGTGTTAAGCTGGACAAAGTTCCTGAAGGTGGCTGGACTTGTGAAGAGTGCATGTTGAGAATAGACACTGAGAAAGCAGAGCAGGATAAAGTTGAAGAGGCTCCTGGAATAACAAAAGGACATCAAGAGTGCCAAAAATCTAGTAGtggttcaaaattaaaatttagatcTTCATCTCCTGGGAAAAGTAGAAAGAATGGTGCCTCTAAATTATCAGCTAAGAGACATGCTGTCCCAGTAGAAGCTCAGTCCGGGAAAAGACCAAGGGTGGCTGGGACGAGTGTTGTACCTCCAAGGTTATCATCCAAATCCAGCAACAGCTCTTCACCCTGTGCAGACATCTCAGGGAAGAACTTAAGGAAGGGGAAAATGAAATCAACCAAAGGTAAAGCTGTTGCTTCTGTGCCCCAATTTTCTTCTGATAATCCGGAAAAGGCTAAGGCTCCTCATGCTTTTGGGGATAAGAGACATTTGGGCATCATAGAAGCTGAGTTAGAGAAAAAACCAAAGGCTCTGGAAACAAGAGATGTATCCTCCAAAACATCCAAATCAAGCAAATCAAAACTTTCGGAGAAAGAAAAATTGGAGGTTACTGATGATGTCACTTCTGTGAAGCAATCTTCCTTAGGTACTCAGGGAAAAGCTGAATCATCCTCTGTTTTAGTTGATAAATCCTCAAAACAGGGATCAAAGAGTGGACTATCACAGGATAAATGTCCTCTATTGAAGTCAAGATCTTCAGAGGCTGTGGACATGGAATTGAAAGGACAGCTGGAAAAGGGTAGTTGTTCGCAAGAGCAGGAGGTTGCAACTAATGGAGCCGATGATGGTTGCATGGGGAGAAAAGATTCTAGAATGGTGTCTAAATCTCTCTCACTTAATGTTAGCTCAAATAAATCAAATGCTACTAGCTTGGAGATTTTCTTAGATTGTGTTTCTAACGCTGACGCCTTGAATGAATTAAGCTATGCAAAAGAAACAACGACGACTAATAGGAGGGCTGCTGATTCTGAGGTTCGCCTAGCAAGTTCTTGCCCTGTGGCCTTGAAGAAATCAAACAGtgcaaaaaaaacaaagaaaaataaaaggaaggaaaaatcTGATTTGGATGTTCCTATAATACAAGTTTTTGATAATGAGCAAGATGAAAAAGAAACCGAGTATGGTGATAAAACTTCCCTTTTAGGCTCTACATGTCAGAAAGCTGCTAGACGTATTAAAAAAGATAAGAGAGCTGCTGATTCTGAGATTCACAAAAGCGCTTCTTCCTCTGTGGCCTTGAAGAAATTAAGCTGTGCAAAAGAAACAAAGACAGATAAAAGGAATGAAACATCTGATTTGCATATTCCTATAACCCAAGTTTTTGATTCTGGTGTTGTTTCTGTACAAGGTGAAAAAGAAACCGAGAATGGTGATCAAATTTCCCTTTCAGGTTTCACATGTCATAAGGCTGGTGCATGTATTGAAAAAGACAAGAGGGCAGCTGATTCTGAGATTCATCTAGTAGGTTCTTCTCGCCCTGTGACCTTGAAGAAATTAAGCCGTgcaaaaaaaacaaagagagaTAAAAGGAATGAAACATCTGATTTGCATATTCCTATCATACAAGTTTTTGATTCTCCACAAGCTGAAAAGGAAACTGAGTATGGTGATAAAGCTTCACTTTCAGATTCCACATGTCATAAAGCTGCTACATGTATTGAAAAAGATGAGAGGGCTGCTGATTCTGTGGTTCACCTAGCAAGTGTTTCTTGCCCTGTGGCCTTGAAAAAATTAAGCTGTGCAACAGAAACAGATAAAAGGAAGGAAACATCTGATTTGCATATTCCTATAACACAAGTTTTTCATTCTGGTGTTGTTTCTGTACAAGATGAAAAAGAAACCGAGTATGGTGACAAAAGTTCAGGTTCCACATGTCATAAGGCTGCTGCATGTATTGAAAAAGACAAACTACGCACTGATCATGCTAGGGTTGAAATTTCTTTAGGGACAGACTTGGCTCCATACGCTGCAGCAATTCTTTCTCAACGTTGTGTCATTCCAAAGCTTGATTACATATGGCTAGGACAATTTCTGATTCTAAGCAGTGAGAGGCTTGCGAATTATTGTGATGGGGTGCAAGCACACATATCAGATTGTGCGTCTCCTAAAGTTCTTGAATTGGTGGACAAGTTTCCTAAGATGATTAAGCTGGATGAACTACCTCGCTTGGGAATGTGGCCATCTCAGTTTGTGGAAAGTCAAGCCACAGAAGAAAATATTGCTCTCTATTTTTTTGCAGAAGATCTTGAGAGCTATAGAACATATTATAAAAGATTGTTGGATCATATGACAAAGAATGATTTGGCTCTGAAAGGAAACCTGGATGGAATGGAACTGCTAATTTTTCCATCGAGCGTTCTGCCTAAGGATTCCCAGCGTTGGAATCAATCGTTATTCTTATGGGGTGTATTCAGAGGACGTCGGGTTACAAACTTAACCAGCGTACAAATGAAAATTTCTGAGAAGCAAGAAAATGGAGATGGTGAGAGAAAGCAGACATTGGATGTCATTGCTTCTATCAACAATGGCACTGGTGAAgttgatgaaattgaaaatacaGATGCTCAAATTACAGAAGAGACAAGCTTTCTTTATGGAAATGGTTGTTGTTCTGGATTGTCTGATCCAACGCAAGCAGTTGAGGAAACAGAGAATAGGTCAGAATCTCAGGTTGCATATCTTGATGTTTCACTTTGGCCTAACAGTCCAACGCCAAGTGATGGCATTGTGGAGAATAATGCTGATGCTAACAATGGCGGGCCTTCGGAATCTTCATTTGATTTTGAATGGGAGTATCTGGAGCCGCTAGAGAGGCAAGCGGTGGAAACTTTGGCTTCTCTTTCTGAAGCTCCTCAAAAAGTTAGCTTTTGA 3471 0.3912 LTIGNYNADFHRKDASCSLASIDFSPAFGKNVNEILVLIFSFASTPFEPDNGNYHDVQNFVEELPMAGVVLPNSLDLSDISFLKYFCNSAISLKGEPSVCSGEQVESSLATVSLASCKKHLQKSESVIDHNTMQESLESQPENPRGASDLLDDEVRVCDTCGDLGREELLAFCEKCTDGAAHIYCMRVKLDKVPEGGWTCEECMLRIDTEKAEQDKVEEAPGITKGHQECQKSSSGSKLKFRSSSPGKSRKNGASKLSAKRHAVPVEAQSGKRPRVAGTSVVPPRLSSKSSNSSSPCADISGKNLRKGKMKSTKGKAVASVPQFSSDNPEKAKAPHAFGDKRHLGIIEAELEKKPKALETRDVSSKTSKSSKSKLSEKEKLEVTDDVTSVKQSSLGTQGKAESSSVLVDKSSKQGSKSGLSQDKCPLLKSRSSEAVDMELKGQLEKGSCSQEQEVATNGADDGCMGRKDSRMVSKSLSLNVSSNKSNATSLEIFLDCVSNADALNELSYAKETTTTNRRAADSEVRLASSCPVALKKSNSAKKTKKNKRKEKSDLDVPIIQVFDNEQDEKETEYGDKTSLLGSTCQKAARRIKKDKRAADSEIHKSASSSVALKKLSCAKETKTDKRNETSDLHIPITQVFDSGVVSVQGEKETENGDQISLSGFTCHKAGACIEKDKRAADSEIHLVGSSRPVTLKKLSRAKKTKRDKRNETSDLHIPIIQVFDSPQAEKETEYGDKASLSDSTCHKAATCIEKDERAADSVVHLASVSCPVALKKLSCATETDKRKETSDLHIPITQVFHSGVVSVQDEKETEYGDKSSGSTCHKAAACIEKDKLRTDHARVEISLGTDLAPYAAAILSQRCVIPKLDYIWLGQFLILSSERLANYCDGVQAHISDCASPKVLELVDKFPKMIKLDELPRLGMWPSQFVESQATEENIALYFFAEDLESYRTYYKRLLDHMTKNDLALKGNLDGMELLIFPSSVLPKDSQRWNQSLFLWGVFRGRRVTNLTSVQMKISEKQENGDGERKQTLDVIASINNGTGEVDEIENTDAQITEETSFLYGNGCCSGLSDPTQAVEETENRSESQVAYLDVSLWPNSPTPSDGIVENNADANNGGPSESSFDFEWEYLEPLERQAVETLASLSEAPQKVSF 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1807 1156 MobiDBLite consensus disorder prediction 283 300 - -
Sto11g1807 1156 Pfam PHD-finger 157 204 IPR019787 -
Sto11g1807 1156 MobiDBLite consensus disorder prediction 333 386 - -
Sto11g1807 1156 SMART PHD_3 157 204 IPR001965 -
Sto11g1807 1156 MobiDBLite consensus disorder prediction 387 428 - -
Sto11g1807 1156 MobiDBLite consensus disorder prediction 1102 1126 - -
Sto11g1807 1156 PANTHER - 534 1049 - -
Sto11g1807 1156 PANTHER - 4 316 - -
Sto11g1807 1156 PANTHER - 534 1049 - -
Sto11g1807 1156 PANTHER - 4 316 - -
Sto11g1807 1156 MobiDBLite consensus disorder prediction 1102 1124 - -
Sto11g1807 1156 MobiDBLite consensus disorder prediction 215 467 - -
Sto11g1807 1156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 220 IPR013083 -
Sto11g1807 1156 SUPERFAMILY FYVE/PHD zinc finger 147 208 IPR011011 -
Sto11g1807 1156 MobiDBLite consensus disorder prediction 227 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1807 Sto-Chr11 16796043 16802526 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto11g1807 PHD 6.6e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1807 - - vvi:100243800 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1807 11 16796043 16802526 Sto11g1807 11 16796043 16802526 ECH