Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1802 ATGGCAATATCctcctccacctcctacttgcctgAATTCGGGATATTGGAGGATCCTACATTGTTTGAGCAATACTCGATGGATTATGATTTCCAATCGTTGGTGTCGGAGAGTGGAGATAGCTATAATTCCTGTTATAACAATAATGAGGTTATTCCTGAAAGACCACCAAGACCAAACAAACAGCTCAAGACCAAGCCTTGTGCTTCGAATTCTAATTTGTCATCCTTCCACCTTATTTCCTTTGGGGAGTACAATTCCAAGTCCAACACTACTACATCCTCCACATCATTTGCTAGTTCCAATAATATTGTGAAGCTTCAGGAGAAACACAACCAAAACTTATTGGATTTCGGATCTGCATACCACAccaataataatactaattacaTGGCTGCCACTATGACCAGAAATGCACTCCAAGCTCAAGACCACGTCATGGCCGAAAGAAAACGGAGGGAGAAGCTCAACCAGAGATTCATTACCCTTTCCTCCATCATTCCTGGCCTCAAGAAGATGGATAAGGCGTCAGTGTTGGAAGATGCTATAAAGTATGTGAAGCAACTGCAGGAGAAGGAGAAGGTTCTGGAAGAACAGGTGGGCATGAAGACGGCGGAATCAGCTGTGTTACTTAGAAGATCTCATGTTGTtttggatgatgatgatgatgatgagaattATTGTGAGGGCGGCTTCTTCAACCATTCACTTCCAGAAATAGAAGTAAGGGTTATGGGAAAGGAGGTACTCATTAGAATCCACTGCGACAAACACATTGGGTGTGAGGCTGCCATACTCAAAGAATTAGAAAACCTTCATCTCAACGTCCACACTACTAGCATTATACCCTTTGGGAAAACCACCCTCTCTATCACCATAGTAGCTCAGATGGAAAAGCAGCAGTACTGTATGACAGCAAAGGATTTTGTAAGAAGCTTGAGGAACACATTGGGGCAACTAGTTCGTTAA 969 0.3983 MAISSSTSYLPEFGILEDPTLFEQYSMDYDFQSLVSESGDSYNSCYNNNEVIPERPPRPNKQLKTKPCASNSNLSSFHLISFGEYNSKSNTTTSSTSFASSNNIVKLQEKHNQNLLDFGSAYHTNNNTNYMAATMTRNALQAQDHVMAERKRREKLNQRFITLSSIIPGLKKMDKASVLEDAIKYVKQLQEKEKVLEEQVGMKTAESAVLLRRSHVVLDDDDDDENYCEGGFFNHSLPEIEVRVMGKEVLIRIHCDKHIGCEAAILKELENLHLNVHTTSIIPFGKTTLSITIVAQMEKQQYCMTAKDFVRSLRNTLGQLVR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1802 322 Coils Coil 179 206 - -
Sto11g1802 322 SMART finulus 146 195 IPR011598 GO:0046983
Sto11g1802 322 CDD bHLH_AtNAI1_like 142 214 - -
Sto11g1802 322 Pfam Helix-loop-helix DNA-binding domain 143 190 IPR011598 GO:0046983
Sto11g1802 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 213 IPR036638 GO:0046983
Sto11g1802 322 MobiDBLite consensus disorder prediction 46 69 - -
Sto11g1802 322 Gene3D - 133 204 IPR036638 GO:0046983
Sto11g1802 322 PANTHER TRANSCRIPTION FACTOR NAI1 24 320 - -
Sto11g1802 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 140 189 IPR011598 GO:0046983
Sto11g1802 322 PANTHER BHLH TRANSCRIPTION FACTOR 24 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1802 Sto-Chr11 16749144 16751258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1802 58 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 40.860 1.66e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Sto11g1802 HLH 1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1802 - - gmx:100798011 235.343