Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1800 ATGTCCGAGTATCGCGCCCTCCTTTCCCTCAAATCGGCCATTTCCGTTTCCGACGACCCTCCCTCTCCTCTTTCCTCCTGGAATGCCTCCACTAGCCACTGTACCTGGTACGGCGTCACCTGCGACTCCCACCGCCACGTTATTGCTCTTAACCTCACCGACCTTAACCTCTCCGGCACACTCTCAAACGACATCGCTCACCTGCCGTTTCTCTCGAATCTCTCCGTCGCTGTTAATCAGTTCTCTGGACCCATCCCGCCCGGGATTTCTTTCGTCTCTGGACTCCGATTTCTCAACCTCTCTAACAATGTCTTCAATGGCACTTTCCCTGCCGAGCTTTCCCAGCTCAAGAATCTTCAGGTTCTCGACCTTTATAACAACAATATGACCGGAGACCTCCCGCTTGTCGTCACCCAGATGCCGAATCTCCGGCATTTGCATCTCGGAGGGAACTTCTTCGCCGGTCAGATCCCGCCGGAGTACGGACGGTGGGAACGTTTGGAATACTTGGCTGTTTCCGGTAATGAGCTAACCGGAAAAATACCGCCGGAGATCGGAAACCTTACAAACCTCCGGGAGCTTTACATCGGATATTACAACGCGTACGAGGATGGTATACCGCCTGAGATTGGGAACTTGTCGGAATTAGTACGGTTGGACGCAGCGAACTGTGGATTAACCGGAAAGATACCGCCGGAGATCGGGAAGCTTCAGAAACTCGATACTCTGTTCCTTCAAGTGAATGCGCTTTCAGGGCCTCTGACGCGTGAGCTTGGGGACTTGAAGAGCTTGAAATCCATGGATTTGTCGAACAATATGCTTGAGGGTGAAATTCCGGAGAGTTTCTCTGAGCTCAAGAACTTGACGCTATTGAACCTGTTCAGAAATAAGCTTCACGGAGCGATTCCCGAGTTCATCGGAGAACTTCCTTCCTTGGAGGTTTTACAGCTGTGGGAGAATAACTTCACCGAAAGCATACCTCAGGGTTTGGGGCAGAATGGGAGGCTCGTGCTCGTTGATCTCTCGTCGAACAAATTGACTGGTACTCTGCCTCCTGATATGTGCAATGGGAATCATCTTCAGACTTTAATAACTCTCGGGAATTTCCTATTTGGTCCTATTCCTGAGTCGCTCGGGAGATGCGAGTCATTAACTCGAATCCGTATGGGTGAGAATTTTCTGAATGGGTCAATTCCAAAGGGCCTCTTTGGGCTTCCTAAACTCACACAGGTTGAACTTCAGGACAATTATCTCTCAGGCCAATTTCCTGTAGCAGATTCTATTTCTGTTAATCTTGGCCAGATCAGTCTCTCTCATAACCAGCTTTCTGGGTCGTTACCGCCGGCGATAGGTAACTTTTCCGGCATGCAAAAACTCCTCCTTGATGGAAACAGGTTCTCGGGTCAAATACCCCATGAGATTGGGAGGTTACAGCAGCTTTCAAAGATAGATTTTAGTCATAACAAGTTCTCTGGCCCTATAGCTCCAGAAATAAGTCAGTGTAAACTGTTAACATTCGTTGATCTTAGCCGAAACGAGCTTTCGGGTGAGATTCCGAAGGAAATCACCAGTATGAGGATACTGAATTACTTGAATCTCTCCAGAAATCATTTTGTTGGTAGCATTCCTTCATCAATATCAAGTATGCAAAGCTTAACTTCTGTTGATTTTTCATATAACAATCTCTCTGGTTTGGTTCCTGGCACTGGTCAATTTAGTTACTTCAACTACACATCCTTCCTGGGAAACTCTGAACTCTGTGGTCCTTATTTGGGTCCCTGCAAGGATGGAGTTGCCAATGGTGCTCACTCACCTCACGTCAAAGGTCCACTTTCAGCTTCTTTGAAGCTTCTGCTGGTAATTGGGTTGCTTTTATGTTCAATTGTTTTTGCTGTAGCAGCAATAGTTAAAGCAAGGTCATTGAAGAAGGCGAATGAAGCTCGATCGTGGAAATTAACAGCATTCCAGCGCTTGGACTTCACTGCGGATGATGTTTTGGATTGTTTGAAGGAAGACAATATAATAGGCAAAGGAGGTGCAGGCATTGTGTACAAGGGTTCAATGCCTAATGGGGATCAGGTTGCTGTGAAAAGGCTACCAGCTATGAGCAGAGGATCTTCCCATGATCATGGATTCAATGCAGAGATTCAGACACTGGGGAGAATCCGACACAGACACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAAACTAACCTTTTGGTCTATGAATACATGCCCAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGGGGCCATTTGCATTGGGACACAAGGTATAAAATTGCTGTGGAGGCAGCAAAAGGGCTTTGCTATCTACACCATGATTGTTCCCCTCTTATTGTCCATCGAGATGTGAAATCAAACAATATCCTTCTTGACTCCAATTTCGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCCATTGCTGGTTCATACGGATACATAGCTCCAGGTTTGACTGCAGAATATGCATACACACTGAAAGTGGATGAGAAAAGTGATGTGTACAGCTTTGGAGTGGTTCTTTTAGAGCTTATAACGGGGAGGAAACCAGTTGGGGAGTTTGGTGATGGTGTGGACATAGTTCAATGGGTAAGGAAAATGACAGATTCAAACAAGGAAGGAGTTCTAAAAGTGCTTGATCCTAGACTCCCATCAGTTCCTCTTCATGAGGTGATGCATGTGTTCTATGTAGCCATGCTCTGTGTTGAAGAACAAGCAGTGGAGAGGCCAACTATGCGTGAAGTTGTTCAAATCCTAACCGAGCTTCCAAAGCCACCTACTTCAAAACAGGCAGGAGGAGACTCCACCACAATCACAGAGTCCTCtctctcatcatcatcaaacGCTCTTGATTCTCCCAAAAACACAGCTTCCAAAGAACTCCAAGATCATCAGCATCCTCCTCAATCACCACCACCAGATCTTCTTAGCATTTGA 3012 0.4608 MSEYRALLSLKSAISVSDDPPSPLSSWNASTSHCTWYGVTCDSHRHVIALNLTDLNLSGTLSNDIAHLPFLSNLSVAVNQFSGPIPPGISFVSGLRFLNLSNNVFNGTFPAELSQLKNLQVLDLYNNNMTGDLPLVVTQMPNLRHLHLGGNFFAGQIPPEYGRWERLEYLAVSGNELTGKIPPEIGNLTNLRELYIGYYNAYEDGIPPEIGNLSELVRLDAANCGLTGKIPPEIGKLQKLDTLFLQVNALSGPLTRELGDLKSLKSMDLSNNMLEGEIPESFSELKNLTLLNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTESIPQGLGQNGRLVLVDLSSNKLTGTLPPDMCNGNHLQTLITLGNFLFGPIPESLGRCESLTRIRMGENFLNGSIPKGLFGLPKLTQVELQDNYLSGQFPVADSISVNLGQISLSHNQLSGSLPPAIGNFSGMQKLLLDGNRFSGQIPHEIGRLQQLSKIDFSHNKFSGPIAPEISQCKLLTFVDLSRNELSGEIPKEITSMRILNYLNLSRNHFVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNSELCGPYLGPCKDGVANGAHSPHVKGPLSASLKLLLVIGLLLCSIVFAVAAIVKARSLKKANEARSWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGSMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPGLTAEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPTSKQAGGDSTTITESSLSSSSNALDSPKNTASKELQDHQHPPQSPPPDLLSI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1800 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Sto11g1800 1003 Gene3D Phosphorylase Kinase; domain 1 634 746 - -
Sto11g1800 1003 Pfam Leucine Rich Repeat 263 285 IPR001611 GO:0005515
Sto11g1800 1003 SMART LRR_typ_2 477 501 IPR003591 -
Sto11g1800 1003 SMART LRR_typ_2 309 333 IPR003591 -
Sto11g1800 1003 SMART LRR_typ_2 140 164 IPR003591 -
Sto11g1800 1003 SMART LRR_typ_2 261 285 IPR003591 -
Sto11g1800 1003 SMART LRR_typ_2 116 139 IPR003591 -
Sto11g1800 1003 SMART LRR_typ_2 549 572 IPR003591 -
Sto11g1800 1003 Pfam Leucine Rich repeats (2 copies) 117 154 IPR025875 -
Sto11g1800 1003 MobiDBLite consensus disorder prediction 954 981 - -
Sto11g1800 1003 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 990 - -
Sto11g1800 1003 Pfam Leucine rich repeat N-terminal domain 3 42 IPR013210 -
Sto11g1800 1003 SUPERFAMILY L domain-like 333 594 - -
Sto11g1800 1003 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 990 - -
Sto11g1800 1003 Gene3D Ribonuclease Inhibitor 351 595 IPR032675 -
Sto11g1800 1003 ProSiteProfiles Protein kinase domain profile. 669 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1800 1003 SMART serkin_6 669 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1800 1003 Gene3D Ribonuclease Inhibitor 253 350 IPR032675 -
Sto11g1800 1003 MobiDBLite consensus disorder prediction 948 1003 - -
Sto11g1800 1003 Pfam Protein tyrosine and serine/threonine kinase 671 944 IPR001245 GO:0004672|GO:0006468
Sto11g1800 1003 Gene3D Transferase(Phosphotransferase) domain 1 747 965 - -
Sto11g1800 1003 SUPERFAMILY Protein kinase-like (PK-like) 665 944 IPR011009 -
Sto11g1800 1003 Gene3D Ribonuclease Inhibitor 1 157 IPR032675 -
Sto11g1800 1003 Gene3D Ribonuclease Inhibitor 158 252 IPR032675 -
Sto11g1800 1003 SUPERFAMILY RNI-like 50 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1800 Sto-Chr11 16714530 16717697 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1800 1 978 Receptor kinase-like Gene Family AT5G65700 82.892 0.0 1630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto11g1800 PK_Tyr_Ser-Thr 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1800 - - cic:CICLE_v10024796mg 1659.04