Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1784 ATGGGAAGGGCTCCTTGCTGTGACAAAGCGAACGTGAAGAAAGGGCCATGGTCGCCGGAGGAAGACGCCAAACTCAAAGCTTACATCCAACAAAACGGCACCGGAGGTAACTGGATAGCCCTTCCCCACAAGATAGGGCTTAAGAGATGTGGGAAAAGCTGTCGTCTTAGGTGGTTGAATTATCTTCGCCCAAACATCAAGCACGGCGCTTTCACTGAAGACGAAGACAACATCATTTGCAGCCTCTATGTTAGTATTGGAAGCAggtGGTCTATAATAGCAGCGCAATTACCAGGGAGAACGGACAATGATATAAAGAACTATTGGAACACAAAGCTGAAGAAGAAGCTGCTTGGGTTTGATCAAAGCTTGGAACTTGATGATGAGAGTGGTGGTGATTACTATAGAATGTTGATGTTGGAGTTGGATAATAATGAGTCCAACAATAATATTATGCAGGACATGATGATGAGTAGTAGTGGTCACGTGACTAATAACTATAATAATGGTAGCTCCACAACTACTACTACTTCAACAGAAAGTTGTATCAGCTGGGGAGGAGATATGACCTCTCTACTTTACTCTCCAACTCTGCTTCCTCCTCATGATCATTTCCAAGCACCTCATCAACAACATCTTGCTTTCCAGGAAGAATATTCTAGAAGCTCCTTTGGAGGATGCAATCACAATTATTCTCTACATGGGGTGGTGATGGGGCCAGAAGATGAGATACTAAAAATTCTTTGTATGGGGTTGAAATGA 762 0.4304 MGRAPCCDKANVKKGPWSPEEDAKLKAYIQQNGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGAFTEDEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLGFDQSLELDDESGGDYYRMLMLELDNNESNNNIMQDMMMSSSGHVTNNYNNGSSTTTTTSTESCISWGGDMTSLLYSPTLLPPHDHFQAPHQQHLAFQEEYSRSSFGGCNHNYSLHGVVMGPEDEILKILCMGLK 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1784 253 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Sto11g1784 253 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Sto11g1784 253 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Sto11g1784 253 Gene3D - 69 154 - -
Sto11g1784 253 CDD SANT 16 62 IPR001005 -
Sto11g1784 253 PANTHER OS09G0431300 PROTEIN 1 176 - -
Sto11g1784 253 PANTHER OS09G0431300 PROTEIN 1 176 - -
Sto11g1784 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Sto11g1784 253 SMART sant 67 115 IPR001005 -
Sto11g1784 253 SMART sant 13 64 IPR001005 -
Sto11g1784 253 CDD SANT 70 113 IPR001005 -
Sto11g1784 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Sto11g1784 253 Gene3D - 7 68 - -
Sto11g1784 253 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Sto11g1784 253 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1784 Sto-Chr11 16583234 16600023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1784 1 118 MYB Transcription Factor Family AT3G49690 88.983 1.96e-78 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g1784 Myb_DNA-binding 3.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1784 K09422 - cit:102612601 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3558 6 41008457 41009573 Sto11g1784 11 16583234 16600023 CCT