Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1762 ATGTCTATTATTATCTCCCCTGAACACCAATTGGGCGCTCTTGATGACTTGTATTGCAATGAAGCAGCAGCAGCCAGCGACGACGCCGTTTCATTCCACTCCGAGAATCTCCCTTGGGATTCCGATCACGAAGGCTGCGTTTTGACGTTATTGGACTCCGAACTCGATCAAATACAGGACAAGCAAAAATCACTCGCGCAGCTTCGCGAAAACACGTGCCTCGTATCTGCTCGAGAAGAAGCAATTAATTGGATACTGAAGGTACAAGATTACTACAGTTTTAGACCCGAAACGGCGTATCTTTCTGTAAACTATCTTGATCGTTTTCTTTTGTCACACTCATTGCCGCGAGATAGAGGGTGGCCTATGCAGCTATTGGCAGTTGCTTGCGTGGCAGTTGCGGCGAAAATGGAAGAAAGACGTGTCCCACTTTTATTGGACCTGCAGACGATGGAGCCGAGGAGGCGTGTACTGTTTAAGCCCAAAACAGTTCAGAGGATGGAGCTCTTGGTGATGGCTACTCTCAGATGGAGATTGCGTTGTGTGACCCCTTTCGATTTTGCTCCACTTTTCGTAGCtaaactttcttcttcttcctctgcttCCATCAAGACCACTTTGAATCACATTATTTCCCGTGTCTCACATGTTATTAATAGAACATGTTTAGTGACGGATTTCTTTGAGTTTCGTCCATCCACAATAGCAGCAGCTGCTCTGCTATGGGTGATCCATCAATATGTCGATGAGCAGATGAGTTTAAGCTGCTTACACCAATATATAAACACAGAGATGGTGCAGAAATGTTACAAGCTCATGAAGAAGAAGCACAAAATTTTGCAATCACTACATTTTGTAGCGACGGAAGTAGAGTCGTCGCTGCCTCCGAGTCCTACTTGTGTGCTCGATCATGCGGCTATGCAAGAAAGCATCAAAGATCTCGCGGCCTGA 951 0.4479 MSIIISPEHQLGALDDLYCNEAAAASDDAVSFHSENLPWDSDHEGCVLTLLDSELDQIQDKQKSLAQLRENTCLVSAREEAINWILKVQDYYSFRPETAYLSVNYLDRFLLSHSLPRDRGWPMQLLAVACVAVAAKMEERRVPLLLDLQTMEPRRRVLFKPKTVQRMELLVMATLRWRLRCVTPFDFAPLFVAKLSSSSSASIKTTLNHIISRVSHVINRTCLVTDFFEFRPSTIAAAALLWVIHQYVDEQMSLSCLHQYINTEMVQKCYKLMKKKHKILQSLHFVATEVESSLPPSPTCVLDHAAMQESIKDLAA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1762 316 SMART Cyclin_C_2 182 292 IPR004367 -
Sto11g1762 316 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 20 308 - -
Sto11g1762 316 ProSitePatterns Cyclins signature. 78 109 IPR006671 -
Sto11g1762 316 Coils Coil 51 71 - -
Sto11g1762 316 Gene3D - 181 271 - -
Sto11g1762 316 SUPERFAMILY Cyclin-like 164 294 IPR036915 -
Sto11g1762 316 Pfam Cyclin, N-terminal domain 54 179 IPR006671 -
Sto11g1762 316 Gene3D - 62 180 - -
Sto11g1762 316 SUPERFAMILY Cyclin-like 49 179 IPR036915 -
Sto11g1762 316 Pfam Cyclin, C-terminal domain 182 277 IPR004367 -
Sto11g1762 316 CDD CYCLIN 78 172 IPR013763 -
Sto11g1762 316 PANTHER CYCLINS 20 308 IPR039361 -
Sto11g1762 316 SMART cyclin_7 83 173 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1762 Sto-Chr11 16420779 16423589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1762 16 274 Core Cell Cycle Gene Families AT1G70210 40.299 3.78e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1762 K18810 - gmx:100799323 327.405