Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1752 ATGGTATTAATTTTGCTTCCGCTGGATTTGAGGCTCTTCTCCAAACTCGTCAAGGAACACTTTCAACACCAACAATATCAACAAGAAGaagatcatcttcatcatcatcaatccTTCAATAATTCCACAAGCATAACCTCTAGCAGCTCTAGATCCTCCAGACAAAACAACAACTATCACCACCAACAAGAAGACGAAGAATGCTTCAACTTTTTCATGGATGAGGAAGACTTGTCCTCGTCTTCTTCTAAGGCGAATTACTATCCCTATCACCCCCACCACCCTAACACTACCACTACAACCACACCCTCTGATTTCTCTTTCTCACTCTCCCCCACCGCGCGTGACCTCAACAGCTTCCAATTCTCGGGCAAGTGGGCTCACGAGGTCCTCATGGAAACCGCGCGTGCTATTGCCGACAAGAACACCGCGCGTGCCCAGCAGCTCATGTGGATGCTCAACGAACTCGCCACGCCATATGGCGACACCGACCAAAAACTCGCCGCGTACTTCCTCCAGGCGTTGTTCAGCCGCGTCACCGACTCCGGCGACCGCACCTTCCGCGCCTTAACCTCCGCGTCGGAGAAGACATGCTCCTTCGAGTCGACCCGCAAGACGGTCCTGAAGTTCCAAGAGGTCAGCCCGTGGACCACCTTCGGTCACGTCGCTTCCAATGGCGCAATCCTGGAGGCCCTAGAAGGCGAGCCTAGGCTACACATTGTGGACATCAGCAACACGTATTGCACCCAATGGCCGACGCTCCTCGAGGCGTTGGCCACTCGCAGCGACGAAACCCCGCACCTGAGGCTGACCTCCGTCGTGACGCGCCGCCGCGGGGCCGCCGGCGGCGGCGGATCCGTCACGGCGGTTCAGAGGGTCATGAAGGAAATTGGGAGTCGGATGGAGAAATTCGCGAGGCTGATGGGCGTGCCGTTTAAATTCCACGTCATCCATCACGCGGGAGATCTCTCTGATTTCGATTTCGGCCAATTGGGAATCAGAGACGACGAGGCTCTAGCGATCAACTGTGTGAACGCGCTGCACTCGATCGCTCCCCTTGGGAACAACCGCGACGTGTTGATTTCCTCGTTCCGGAGGTTACGGCCTCGGGTAGTgacggtggtggaggaggaggcTGATCTCGATGTGGGGCCTCATGGGTTTGAATTCGTACGAGGTTTCCAAGAGTGTTTgaggtggtttagggtttacttcgAGGCATTGGACGAGTGCTTCCCACGCGCGAGCAATGAGCGGTTGATGCTCGAGCGGGCGGCGGGGAGGGGAATGGTAGATTTGGTGGCTTGTGCGGCGTCGGAGTCGGTGGAGAGGCGGGAGACAGCGGCGCGTTGGACGCAAAGAATGCATGGGAGTGGGTTCAATGCAGTGTCGTTTAGTGATGAAGTTTGTGACGATGTGAGAGCATTATTGAAGAGATATAAAGAAGGATGGGGAATAACACAATGTTGTGACGCCGGAATATTCTTGGCGTGGAAGGACCAGCCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA 1536 0.5299 MVLILLPLDLRLFSKLVKEHFQHQQYQQEEDHLHHHQSFNNSTSITSSSSRSSRQNNNYHHQQEDEECFNFFMDEEDLSSSSSKANYYPYHPHHPNTTTTTTPSDFSFSLSPTARDLNSFQFSGKWAHEVLMETARAIADKNTARAQQLMWMLNELATPYGDTDQKLAAYFLQALFSRVTDSGDRTFRALTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGEPRLHIVDISNTYCTQWPTLLEALATRSDETPHLRLTSVVTRRRGAAGGGGSVTAVQRVMKEIGSRMEKFARLMGVPFKFHVIHHAGDLSDFDFGQLGIRDDEALAINCVNALHSIAPLGNNRDVLISSFRRLRPRVVTVVEEEADLDVGPHGFEFVRGFQECLRWFRVYFEALDECFPRASNERLMLERAAGRGMVDLVACAASESVERRETAARWTQRMHGSGFNAVSFSDEVCDDVRALLKRYKEGWGITQCCDAGIFLAWKDQPVVWASAWRP 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1752 511 MobiDBLite consensus disorder prediction 27 61 - -
Sto11g1752 511 Pfam GRAS domain family 129 510 IPR005202 -
Sto11g1752 511 MobiDBLite consensus disorder prediction 83 102 - -
Sto11g1752 511 ProSiteProfiles GRAS family profile. 118 510 IPR005202 -
Sto11g1752 511 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 510 IPR005202 -
Sto11g1752 511 MobiDBLite consensus disorder prediction 38 57 - -
Sto11g1752 511 PANTHER PROTEIN SHORT-ROOT 38 510 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1752 Sto-Chr11 16340537 16344673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1752 58 511 GRAS Transcription Factor Family AT4G37650 62.575 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto11g1752 GRAS 6.2e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1752 - - gmx:100820459 690.263