Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1744 ATGGCCATAAGGCCCTTCCAGCTCTCCTTCTCGCGTGATAGATTATTGATCTCTCTTCTACGCACTtctcatccttcttcttcttcttcttcttcctctgcctGGCGTTCTAAACGTTCTCCATCTCCTCAATCACTTTCCCCTATTTTTCTCTTCCGTCACTGCGCGGCGTCGGCGGCAACTCCGGTCTCACGCGCTCGCAAGTATCTGCCACCATCCAGCACGCTGGCGCAGAAGATTGGAAAAGCCACGCGCCGACCCGGCGCTGCCTCTAAGGCGAGGGTTTATGCAGATGTCAACGTTGTCCGTCCCAAGGAGTACTGGGACTATGAGTCCCTTACCGTCCAGTGGGGGGAACAAGATGATTATGAGGTGGTCAGGAAGGTTGGCAGGGGGAAATACAGTGAGGTGTTTGAAGGTGTTCACTGCACTGATAATGAAAAATGTGtcatcaagattctgaaaccggtgaagaagaagaagATCAAAAGGGAGATCAAAATATTGCAAAATCTTTGCGGAGGGCCCAATATTGTAAAATTGCTCGACATTGTTAGAGATCAGCAATCAAAGACTCCAAGCCTTAtttttgaatatgttaataacACTGATTTTAAAGTCCTCTATCCTACACTCTCAGACTATGATATACGATATTACATCTATGAACTTCTTAAGGCCCTGGACTATTGCCATTCACAAGGAATCATGCATCGGGATGTAAAGCCGCATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGCAAAGAATATAATGTTCGTGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTTCTAGTTGATCTTCAAGACTATGATTACTCTTTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATATTCCGTAAGGAGCCTTTCTTTTATGGGCATGATAACTATGATCAGCTGGTCAAAATTGCAAAAGTACTTGGGACAGATGAAATGAATGCATATTTGAACAAGTATCGTATAGAGTTGGACCCGCATCTTGCAGCACTAGTTGGAAGGCATAGCCGGAAGCCATGGACAAAGTTCATTAATATAGAAAATCAACATTTGGCTGTTCCTGAGgctaTTGACTTCGTTGACAAGTTACTGCGATATGACCATCAAGAACGACCCACTGCAAAAGAAGCCATGGCTCATCCTTACTTCAATCCAATCAGAAATGCAGAAAGCAGCAGAGCTCGTAAAGGCAAGTTTTCCGCTATTATCATCGACTGA 1293 0.4145 MAIRPFQLSFSRDRLLISLLRTSHPSSSSSSSSAWRSKRSPSPQSLSPIFLFRHCAASAATPVSRARKYLPPSSTLAQKIGKATRRPGAASKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEMNAYLNKYRIELDPHLAALVGRHSRKPWTKFINIENQHLAVPEAIDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNAESSRARKGKFSAIIID 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1744 430 Gene3D Transferase(Phosphotransferase) domain 1 200 408 - -
Sto11g1744 430 CDD STKc_CK2_alpha 104 408 IPR045216 GO:0004674|GO:0006468
Sto11g1744 430 Pfam Protein kinase domain 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1744 430 SUPERFAMILY Protein kinase-like (PK-like) 96 412 IPR011009 -
Sto11g1744 430 SMART serkin_6 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1744 430 ProSiteProfiles Protein kinase domain profile. 123 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1744 430 PANTHER CASEIN KINASE II SUBUNIT ALPHA 31 414 IPR045216 GO:0004674|GO:0006468
Sto11g1744 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Sto11g1744 430 PANTHER BNAA04G13490D PROTEIN 31 414 - -
Sto11g1744 430 Gene3D Phosphorylase Kinase; domain 1 123 199 - -
Sto11g1744 430 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1744 Sto-Chr11 16269160 16277560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1744 123 416 Core Cell Cycle Gene Families AT1G20930 29.781 1.78e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Sto11g1744 Pkinase 2.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1744 K03097 - pvy:116111355 684.871