LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto11g1742	ATGAAAGCTCCTAACtttaccttcttcttcttcatcatcgtcACATCCATATTCTCTATATCCCACACTACTCAACATGAGCCTCAACCAAGACGAATCCTCCACCAACCATTGTTTCCGGTCACTTCCGCTCCGCCACCAGGCACCGGCGACTCGCCGCTGGCGGCCGACACCCCGCCATCTCCGGACATTCCCTTCTTCCCCGAAGGCCCACCGCCGTCGGATCAGAATCAAGCAGCGCCGTCGATTCCCAACCCAACGGCAACGACATCAACGACAACGACAACGACAGAGAAGGGAATTCCCACAAAGAAAGTAGCGATTGCTATGTCAGTGGGAATTGTGACGCTTGGTATGCTCTCTGCTTTTGCCTTCTTCTTGTACAGACACCGAGCCAAGCATCCCGCCGCCGGCGTGTCTCACAAGAAGATTCTGGAAGGTTCTAATAATAATTCCAGAGCAGcgccttctcctcctcctcctccctcgAATTTTCTCTACATTGGGACTGTGGAGCCCACTGTTACGGAATCAGCCAATGGAGGAAGCATAAGCAAGTCgccttatcatcatcatcttccggTGAAGCGATCCGATCGGTACCGTCCGAGTCCGGAATTGCAGCCATTGCCGCCGCTGAGTAAGCCTCTGGATGGGAATTTCCCACCGGCggtgtcttcttcttcttcttctccgtcgcCGTCGGAGGAGGAGGGGGACGAGGAGAGTCATGAAATGATGTCGTTTCACTCGCCGCAGGGGTCGTCTTTGAGTTACGACGATAGCTATTACACGCCGGTTTCGCGTCAGAGTTCCGTTCCGTTTTCAAAGCGAACATCTCCAAAATCTCGTCTTTCGGCTTCCTCGCCGGATATAACAAGGCATCCCATTATAATACCATCTATAAAGCAAGCTCCGCCGCCGCctccaccaccgccgccgccgccgtcaGAACCATCTCAAGTACCCTCCGGTCATTCAAGAAGGCCGAAATTCTCAGCGCCTCCTCCGGCACCGAATTTGACACATCTTCAGTCATCATCGGACAACGCGCCACCTccacctccaccaccaccaccgccgccgccaccaccTCCGCCGCCTCAAGTGACATTGAGGAAAACAGAGTCCCCTGCAATTAGTGTTTCCTCATGCTCTGTTTCAAGAAAGAGACAGTCTTGGTGTGGAAGTGAAGGAGAAGGGGCATTTTCGGGTAAAAGTAAAGGTAGAGTTTTGGAGTCAGAAGTTGTGGATAAAAGGGTTGGGTGTTCGGAGAAGAAgatggaagatgatgatgatgatgatgatgacgtgGATGGAGGGAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTGCGTGCGACCTCAGACCGAGCTACAGTGTGGGACCAGCTGAAATCAAGCTCATTTCAATTAAATGAGGATATGATGGAGACTCTGTTTGGGTGCAATACTACTAGAGATGTTGTCCCAAAAGAAAGTACTAGAAAACCAGTTGTTCCGCCTGTTGTTGATCAGGAGGAGAGGGTGTTAGACCCTAAAAAGTCACAGAACATTGCTATATTACTGAGGGCACTCAATGTCACTAGAGATGAGGTGTCTGAAGCTCTTCTAGATGGGAATCCAGAAGGTTTAGGTGCTGAACTATTGGAAACTCTAGTAAAGATGGCTCCAACTAAGGAAGAAGAGATAAAACTTAAAAAGTATGATGGTGACCTTTCAAAACTAGGGTCTGCAGAAAGATTTCTTAAGGCAGTGTTAGATATACCTTTTGCCTTCAAAAGAGTTGAAGCCATGCTATACAGAGCTAACTTTGATTCTGAAGTTAATTACCTAAGAAAGTCTTTCCAAACCCTAGAGGTAGCGAGTGAGGAATTGAaaaacagccggctgttcttgaAACTTCTCGAAGCTGTTTTGAGGACAGGAAACCGAATGAATGTCGGCACGAATCGTGGCGATGCTAAAGCTTTTAAATTGGACACGCTGCTAAAGCTAGTAGATGTAAAGGGGACCGATGGAAAGACAACATTGCTTCACTTTGTGGTCCAAGAGATCATTCGATCCGAAGGTGCAGGCGGTGATTCTGCAAATGGAAGCGTTCAGAATCCAAACCAAATGAGTACGAAATTCAACGAGGACGAGTTCAAGAAGCAAGGATTGAAGGTTGTTGCTGGACTGAGTAGAGACCTCAGCAACGTGAAAAAGGCGGCGACGATGGATTCAGATGTGTTGAGCAGCTATGTTTCGAAGCTTGAGACCGGACTTGAGAAAGTGAGATCGGTCTTGCAATACGAAAAGGCGGGAGATACACAAGGTGGGAATAATTTCTTTAACTCCATGAAGGTATTTCTGAAAGATGCTGAAGAAGAAATTGGAAGGATTAAGGGTGATGAAAGGAAGGCTTTGTTCCTTGTGAAAGAAGTTACAAAATACTTCCATGGGGATGCAGCAAAGGAAGAAGCTCACCCATTCAGAATCTTCATGATTGTGAGAGACTTCCTGAATATTTTGGATCAAGTTTGCAAAGAAGTGGGAAGGATGCAAGATAGAATTATGGTTGGTGCAGCTAGATCCTTCCGAATAGCTGCAACTGCATCGTTACCGGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGCTCGGATGAAGAAAGTTCATCTCCATAA	2673	0.4314	MKAPNFTFFFFIIVTSIFSISHTTQHEPQPRRILHQPLFPVTSAPPPGTGDSPLAADTPPSPDIPFFPEGPPPSDQNQAAPSIPNPTATTSTTTTTTEKGIPTKKVAIAMSVGIVTLGMLSAFAFFLYRHRAKHPAAGVSHKKILEGSNNNSRAAPSPPPPPSNFLYIGTVEPTVTESANGGSISKSPYHHHLPVKRSDRYRPSPELQPLPPLSKPLDGNFPPAVSSSSSSPSPSEEEGDEESHEMMSFHSPQGSSLSYDDSYYTPVSRQSSVPFSKRTSPKSRLSASSPDITRHPIIIPSIKQAPPPPPPPPPPPSEPSQVPSGHSRRPKFSAPPPAPNLTHLQSSSDNAPPPPPPPPPPPPPPPPPQVTLRKTESPAISVSSCSVSRKRQSWCGSEGEGAFSGKSKGRVLESEVVDKRVGCSEKKMEDDDDDDDDVDGGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNTTRDVVPKESTRKPVVPPVVDQEERVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKKYDGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEVNYLRKSFQTLEVASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRSEGAGGDSANGSVQNPNQMSTKFNEDEFKKQGLKVVAGLSRDLSNVKKAATMDSDVLSSYVSKLETGLEKVRSVLQYEKAGDTQGGNNFFNSMKVFLKDAEEEIGRIKGDERKALFLVKEVTKYFHGDAAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRIMVGAARSFRIAATASLPVLNKYHARQDRSSDEESSSP	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	147	411	-	-
	Sto11g1742	890	PANTHER	FORMIN-RELATED	8	890	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	301	321	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	248	290	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	374	393	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	349	372	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	58	79	-	-
	Sto11g1742	890	Gene3D	Formin, FH2 domain	442	866	IPR042201	-
	Sto11g1742	890	PANTHER	FORMIN-LIKE PROTEIN	8	890	-	-
	Sto11g1742	890	SMART	it6_source	435	854	IPR015425	-
	Sto11g1742	890	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	357	852	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	38	98	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	80	98	-	-
	Sto11g1742	890	MobiDBLite	consensus disorder prediction	169	185	-	-
	Sto11g1742	890	Pfam	Formin Homology 2 Domain	440	839	IPR015425	-
	Sto11g1742	890	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	435	865	IPR015425	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto11g1742	Sto-Chr11	16226620	16230402	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sto11g1742	31	880	FH2 protein (formin) Gene Family	AT5G67470	56.904	0.0	810

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto11g1742	-		-	gmx:100803578	932.939