Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1740 ATGGAGGCTTACTTACAAGAAAATTTTGAAGTACAGTCAAAGAATTCGTCTGAAGAGGTTCTTCAGAATTGGAGAAAACTTTGTGGGGTTGTTAAGAACCCTAAACGACGCTTTCGTTTCACTGCCAATCTCTCTAAGCGTGGTGAAGCAGCTGCCATGCGTCGCACTAATCaaGAGAAGCTGAGGGTTGCAGTTTTGGTTTCCAAAGCTGCATTTCAATTCATCCAAGCAGGAGCCCAATCTGGTAATTACACAGTCCCCGAAGAAGTTAAAGACGCAGGTTTCCAAATATGCGCAGATGAACTAGAATCCATCGTCGAAAGCAGAGACACAAAGAAGCTAAAGTACCACGGTGGCGTCACCGGAATTTCCGAGAAGCTCCGTACCTCAATCACCGACGGCCTCACCACCACCAACTCCGACCAGCTCACCAAGAGACAAGACATCTACGGAATCAACAAATTCGCCGAGAGTGAAGTCCGCAGTTTCTGGGTCTTCGTTTGGGAAGCTCTTCAAGACATGACTCTCATGATCCTTGGCTTCTGCGCTGTCGTCTCCCTCGTGATCGGGATCTTAACCGAAGGATGGCCCACCGGGGCCCACGACGGGATGGGAATCGTGGTGAGTATCTTACTCGTGGTGTTCGTCACGGCGACGAGCGACTACCGTCAATCGTTACAGTTCAAGGATTTGGACAAGGAGAAAAAAAAGATCTCGATGCAAGTCACGCGGAATGGGTATAGGAAGAAAATGTCGATTTACGATTTACTCCCCGGTGATATCGTGCACCTCGCTATAGGCGATCAAGTCCCTACTGATGGGCTTTTTATTTCGGGATTCTCCATGTTGATTGACGAGTCCAGCCTGACCGGAGAGAGCGAGCCGGTGATGGTGAATTCGCAGCACCCGTTTCTTTTGTCTGGAACCAAGGTTCAAGATGGCTCGTGCACGATGCTGGTCACGACCGTGGGGATGAGGACTCAGTGGGGAAAACTGATGGCGACTTTGAGTGAAGGAGGAGATGACGAGACTCCCTTGCAAGTGAAATTAAATGGAGTCGCCACTATAATTGGGAAGATAGGCTTATTCTTCGCGGTCATTACTTTTGTCGTTTTGGTGAAGGGGCTCATGACGCGTAAACGACAAGAGGGGAGATTCTGGAGCGTTTCGGGCGATGACGTCATGGAGATGTTAGAATTCTTCGCCGTTGCGGTTACGATCGTTGTCGTTGCCGTTCCAGAAGGATTACCGCTGGCCGTGACGCTAAGCCTTGCGTTTGCtatgaaaaaaatgatgaacGACAAGGCGCTTGTACGACACCTAGCCGCCTGCGAGACAATGGGATCCGCGACGACAATTTGCAGCGACAAAACAGGGACGTTAACGACAAACCGCATGACCGTCGTTAAGACCTGTATTTGTATGAAAAGAAAGGAAGTTATAAGAAACGCAGATTCTTCCAATTTCTTCTCCGATGTTCCAGAATGTGTCCCCAAAATGTTGCTAGAGTCGATATTTAACAACACGGGAGGAGAAGTCGTGgcgagaagaaaaagaagaaagcgcGAGATTTTGGGGACACCCACGGAGACAGCAATATTGGAATTCGGATTATCACTGGGAGGAGATTTTCACAAGGAGAGAAAAGCATGTAAGCTAGTGAAAGTCGAACCATTCAATTCGGAGAAAAAGAGGATGGGGGTGGTGGTGGAGCTTCCAGAAGGAAATTTAAGAGCACATTGTAAAGGTGCGTCCGAGATAATTCTGGCTAATTGTGACAAAGTGATGAATTCGGATGGCGAGGTTGTTCCACTTGACGAGGAAAAAAGCAAGCATCTCAAGGACACGATTGAGTCATTTGCTAGTGAGGCACTCAGGACTCTGTATACTTGTATTGGGATCGTGGGGATTAAGGATCCTGTTCGTCCAGGTGTTAAGGAATCCGTTGCGGTTTGTCGGTCGGCTGGTATTGTAGTTAGAATGGTTACGGGTGATAATATTAATACTGCAAAAGCTATTGCTAGAGAATGTGGGATTTTGACTGATGATGGGATTGCCATTGAAGGTCCAGACTTTAGACAGAAGACTCAGGAGGAGTTGTTTGAACTGATTCCTAAAATTCAGGTTATGGCTCGATCTTCACCTTTAGATAAGCACATGTTGGTGAAACAATTGCGTACTACGTTTGGGGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGATGCACCAGCACTTCATGAAGCTGACATTGGACTTGCAATGGGTATTGCTGGAACTGAGGTTGCTAAAGAAAGTGCAGATGTCATAATTTTGGATGATAATTTCTCCACTATAGTGACAGTGGCCAAATGGGGACGTTCAGTTTACATAAACATTCAGAAATTCGTACAGTTTCAGTTGACAGTTAACGTGGTTGCATTACTAGTCAATTTCTCTTCAGCCTGCACAACAGGAAATGCACCCCTCACAGCAGTTCAACTATTATGGGTGAACATGATAATGGACACATTGGGAGCACTAGCACTCGCAACCGAACCTCCGAACGATGAATTAATGAAGCGTCAACCAGTGGGAAGGAAAGGGAATTTCATCAGTAACGTAATGTGGAGGAACATCTTGGGCCAATCATTGTATCAGGTCTTGTTAATATGGATCCTCCAGATCAAAGGAAAATGGATCTTCGGTTTCAAAGGCCCAGATTCTGATATCTTGTTAAACACACTTATTTTCAACTCGTTCGTCTTCTGTCAGGTGTTCAATGAGATAAGCTCGAGGGAGATGGAGGAGATAGATGTATTTAAAGGGATATGGGACAATCATGTATTCTTGGGGGTCATTAGTTGCACTGTTTTGTTTCAGTTCATAATAGTTGAGTATTTAGGAACATACGCTAATACCACACCGTTGGCTCCCGTTCATTGGTTGTTTTGCGTAGCTGTTGGATATTTAGGCATGCCTATTGCTGCTCGCTTGAAGACCATACATGTCTGA 2994 0.4536 MEAYLQENFEVQSKNSSEEVLQNWRKLCGVVKNPKRRFRFTANLSKRGEAAAMRRTNQEKLRVAVLVSKAAFQFIQAGAQSGNYTVPEEVKDAGFQICADELESIVESRDTKKLKYHGGVTGISEKLRTSITDGLTTTNSDQLTKRQDIYGINKFAESEVRSFWVFVWEALQDMTLMILGFCAVVSLVIGILTEGWPTGAHDGMGIVVSILLVVFVTATSDYRQSLQFKDLDKEKKKISMQVTRNGYRKKMSIYDLLPGDIVHLAIGDQVPTDGLFISGFSMLIDESSLTGESEPVMVNSQHPFLLSGTKVQDGSCTMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLVKGLMTRKRQEGRFWSVSGDDVMEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNRMTVVKTCICMKRKEVIRNADSSNFFSDVPECVPKMLLESIFNNTGGEVVARRKRRKREILGTPTETAILEFGLSLGGDFHKERKACKLVKVEPFNSEKKRMGVVVELPEGNLRAHCKGASEIILANCDKVMNSDGEVVPLDEEKSKHLKDTIESFASEALRTLYTCIGIVGIKDPVRPGVKESVAVCRSAGIVVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFRQKTQEELFELIPKIQVMARSSPLDKHMLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRQPVGRKGNFISNVMWRNILGQSLYQVLLIWILQIKGKWIFGFKGPDSDILLNTLIFNSFVFCQVFNEISSREMEEIDVFKGIWDNHVFLGVISCTVLFQFIIVEYLGTYANTTPLAPVHWLFCVAVGYLGMPIAARLKTIHV 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1740 997 Gene3D - 753 996 - -
Sto11g1740 997 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 995 IPR023298 -
Sto11g1740 997 SFLD p-type atpase 436 788 IPR044492 -
Sto11g1740 997 SFLD Haloacid Dehalogenase 436 788 - -
Sto11g1740 997 Gene3D - 16 76 - -
Sto11g1740 997 SUPERFAMILY HAD-like 452 841 IPR036412 -
Sto11g1740 997 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Sto11g1740 997 Gene3D - 314 458 - -
Sto11g1740 997 PRINTS H+-transporting ATPase (proton pump) signature 613 631 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto11g1740 997 PRINTS H+-transporting ATPase (proton pump) signature 736 752 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto11g1740 997 PRINTS H+-transporting ATPase (proton pump) signature 768 793 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto11g1740 997 Gene3D - 463 638 IPR023299 GO:0000166
Sto11g1740 997 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
Sto11g1740 997 PANTHER CATION TRANSPORTING ATPASE 10 995 - -
Sto11g1740 997 SUPERFAMILY Calcium ATPase, transduction domain A 240 334 IPR008250 -
Sto11g1740 997 Pfam Cation transporting ATPase, C-terminus 821 993 IPR006068 -
Sto11g1740 997 Gene3D - 214 313 - -
Sto11g1740 997 Pfam Cation transporter/ATPase, N-terminus 116 186 IPR004014 -
Sto11g1740 997 Pfam Cation transport ATPase (P-type) 518 595 - -
Sto11g1740 997 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 389 477 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto11g1740 997 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 707 814 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto11g1740 997 Pfam E1-E2 ATPase 237 432 - -
Sto11g1740 997 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Sto11g1740 997 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Sto11g1740 997 PRINTS P-type cation-transporting ATPase superfamily signature 633 644 - -
Sto11g1740 997 PRINTS P-type cation-transporting ATPase superfamily signature 655 665 - -
Sto11g1740 997 PRINTS P-type cation-transporting ATPase superfamily signature 736 755 - -
Sto11g1740 997 PRINTS P-type cation-transporting ATPase superfamily signature 760 772 - -
Sto11g1740 997 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 105 995 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sto11g1740 997 CDD P-type_ATPase_Ca_PMCA-like 143 869 - -
Sto11g1740 997 PANTHER CALCIUM-TRANSPORTING ATPASE 10 995 - -
Sto11g1740 997 Gene3D - 639 752 IPR023214 -
Sto11g1740 997 SMART Cation_ATPase_N_a_2 116 191 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1740 Sto-Chr11 16207555 16212627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1740 1 997 Primary Pumps ATPases AT4G37640 77.920 0.0 1605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1740 K01537 - gmx:100776926 1600.49