Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1738 ATGAGTTGCAACGGCTGCCGAGTCCTTCGAAAAGGTTGCAGCGAGAACTGTGTGTTGCGACCTTGCTTGCAATGGATTGACACACCCCAAGCACAAGGTCACGCCACCGTCTTCGTCGCCAAATTCTTCGGCCGCGCCGGCCTCATGTCTTTCATTTCCAACGTTCCTCAAAACCAGAGACctgCTCTGTTTCAGTCCTTACTGTTTGAAGCGTGTGGGCGAACGGTGAATCCTGTGAACGGAGCCGTCGGGCTTCTGTGGACGGGGAACTGGCACGTGTGTCAGGCCGCCGTGCAGACGGTGCTGCGCGGCGGCACGTTGCGGCCGATGCCGGAGCTTCTCGGCTTGGACGCTCCTGCTCCGGTGGCCACCGATGAGACATCTGAAGCAGAGGTTACGTGCAATGGCGTGTGGACGATCCGAGATCCGAATTCGAATCCGCGATGTGGTGATATTAAGGTCGTCGTCTCCTCCGGCGGCGGCAAACGCAAACGATCTTCGGATGAGTCGTCGACCAAGCTCCTACCGACGACCGATCTCGACCTCCGGTTGACGCCGAGCTTGCTTCAGAAAGTGGCGACATACGGCTGCGGAACGGAAGTCCGGCGGCCGGGAACGCCGTCGATGAACTCGGAGGAATCCGTCACGACGGCGACTTGCTTAGTGGAAAGCGGTGCGATCGGAGATCACTACGGTCACGGCGGAGACCGGAAGCTTCTCAACCTTTTCATTTGA 735 0.585 MSCNGCRVLRKGCSENCVLRPCLQWIDTPQAQGHATVFVAKFFGRAGLMSFISNVPQNQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVQTVLRGGTLRPMPELLGLDAPAPVATDETSEAEVTCNGVWTIRDPNSNPRCGDIKVVVSSGGGKRKRSSDESSTKLLPTTDLDLRLTPSLLQKVATYGCGTEVRRPGTPSMNSEESVTTATCLVESGAIGDHYGHGGDRKLLNLFI 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1738 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 244 - -
Sto11g1738 244 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Sto11g1738 244 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Sto11g1738 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1738 Sto-Chr11 16185923 16186771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1738 1 244 AS2 family AT5G67420 57.414 1.86e-84 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Sto11g1738 LOB 1.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1738 - - gmx:100816189 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1738 11 16185923 16186771 Sto6g3605 6 41297954 41303173 CCT