Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1736 ATGACGACGCAATTCACACCACCTTTGATGCATCAAATCACCCCCTTAATTCCATCCAATTCCAACCCTAGCGCCACCAATACAAATATTACCGATACCAATTCCTGGCTTAAATTCCCCACATCGAAGAAGGCACTGGGCGGATTCAGCTTGGGCGATGGTAATTGCATGGAGCAATTACTCGTGCACTGCGCCAACGCCATCGAATCCAATGACGTCACTCTCGCCCAACAAATCCTCTGGGTTCTCAACAACATCGCTCCCCCAGACGGCGATTCCAACCAACGCCTCGCCTCCACCATCCTACGCGCCCTCACCTCACGCGCCGCCAAATCCGGCAGTTCGAAGATGCTCGCCGCCGTCGCACGCGCCCACCACCCCGCTCTCCCCACGCACACCTTCTCCGTCATCGACTTCGCCAGCTTCGTCGACGTCACCCCCTGGCATCGCTTCGGCTTCACCGCCGCCAATTCGGCCATCCTCGAGGCCACCGAGGGATTCTCCGTCATCCACATCGTCGACCTAAGCCTCACGCGTTGCATGCAGATCCCCACCCTCATCGACGCCATCGCCTCCCGCCACAATAACCACAACCACAGCAACAACGACGTCGTTCTTCCGCCTCCCCTAATCAAACTCACCGTCGCGAGCCTCGCACACGTCATCATCCCACCCACGCTCGACCTCTCCTACGACGAATTAGGCACCAAACTCGTGAACTTCGCACGCTCCAAAAACGTGACCATGGAATTCACAACGATCCCGTGCACTCACGCGGACGGCCTCGCGGCTCTGATCCACTACATCCGCGCGCACCGTTACGTAACAACGACCGAGGAAGCGCTAATCATAAACTGCCACATGATGCTCCATTGCATCCCGGACGAAACCCTACCTAGCGCCGCAACGACGTCGTCGTCGTGCTTGAGATCAATGTTCCTGACGGCGCTACGCGGGTTGGACCCAACGCTCGTCGTTTTGGTGGAGGAGGACGCGGATTTGACGTCGTGTGACTTGGTGGGGAGGTTGAGGAGTGCGTTTAATTACATGTGGATAATGTACGACACGGTGGATACGTTCTTGGCGCGTGGGAGCAAGCAGAGGCAGTGGTACGAagggaatgtgaggtggaaGATTGAGAATGTGATAGCGGAGGAAGGGATAGAGAGGGTGGAGAGGTTAGAGAGTAAGAGTAGGTGGGAGCGGCGAATGAGGGAAGCGGAGTTTCAGGGGATTGGGTTCAGCGACGACGCCGTTTCGGAGGTGAAGGGGATGCTGGAGGAACATGCGGCTGGTTGCACTTGTACTGGGCAATAA 1317 0.5619 MTTQFTPPLMHQITPLIPSNSNPSATNTNITDTNSWLKFPTSKKALGGFSLGDGNCMEQLLVHCANAIESNDVTLAQQILWVLNNIAPPDGDSNQRLASTILRALTSRAAKSGSSKMLAAVARAHHPALPTHTFSVIDFASFVDVTPWHRFGFTAANSAILEATEGFSVIHIVDLSLTRCMQIPTLIDAIASRHNNHNHSNNDVVLPPPLIKLTVASLAHVIIPPTLDLSYDELGTKLVNFARSKNVTMEFTTIPCTHADGLAALIHYIRAHRYVTTTEEALIINCHMMLHCIPDETLPSAATTSSSCLRSMFLTALRGLDPTLVVLVEEDADLTSCDLVGRLRSAFNYMWIMYDTVDTFLARGSKQRQWYEGNVRWKIENVIAEEGIERVERLESKSRWERRMREAEFQGIGFSDDAVSEVKGMLEEHAAGCTCTGQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1736 438 ProSiteProfiles GRAS family profile. 48 438 IPR005202 -
Sto11g1736 438 MobiDBLite consensus disorder prediction 1 27 - -
Sto11g1736 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 27 434 IPR005202 -
Sto11g1736 438 Pfam GRAS domain family 57 430 IPR005202 -
Sto11g1736 438 PANTHER SCARECROW-LIKE PROTEIN 32 27 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1736 Sto-Chr11 16160720 16164720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1736 38 432 GRAS Transcription Factor Family AT3G49950 57.468 1.90e-155 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto11g1736 GRAS 2.7e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1736 - - gmx:100814364 530.406