Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1712 atgataaGCCTTGCTGGTGCCACCACCCACACCATTATCCATATATCTCTTTCGTCTTTCTCTCCAATCTCCATGTCTACTCAAGATCACGAACAACCACTTTTGCGACGAGATGAGCCAGAAGCGACCGCTTATGATTCCTCCGAGAAGGTCGTCGTCGTCGGAATCGGCGAGTCCGACGGCGACGACTCTGGTCAGGCGCCGGCGTTCTCGTGGAAGAAGCTGTGGCTCTTCACTGGCCCTGGCTTTCTAATGAGCATTGCGTTTCTCGATCCCGGCAATTTGGAAGGGGATCTTCAGGCGGGTGCGATTGCGGGCTACTCTCTCTTATGGCTCCTCATGTGGGCTACCGCTATAGGGCTTCTCGTTCAGCTTTTATCGGCTCGGCTCGGCGTGGCCACTGGGAGGCACTTGGCTGAACTGTGCAGAGAGGAGTACCCCACGTGGGCGAGGATGGTGCTGTGGGTTATGGCGGAGTTGGCCCTAATTGGAGCTGATATTCAAGAGGTTATTGGAAGCGCTATTGCTATTAGGATTTTAAGTAACGGAGTTATGCCACTATGGGCAGGGGTTATCATTACGGCTTGTGATTGttttatttttctatttctggAGAACTATGGCGTGAGGAAATTGGAAGCATTTTTTGCTGTGCTCATTGCTATAATGGCACTATCATTTGCTTGGATGTTTGGTGAAGCAAAGCCCAATGGCGTCGATGTTCTTCTTGGTCTTTTGATTCCAAAGCTTAGTTCCAGAACAATACAGCAAGCTGTTGGAGTTGTTGGTTGCATTATTATGCCTCATAATGTATTCTTGCACTCTGCTCTTGTTCAATCAAGACAGGTTGACCAAAGCAAGAAAGGGCGAGTTCAAGAAGCTCTTAATTATTATTCCATCGAGTCCACGGCTGCCCTTGTAGTCTCCttagttattaatatatttgtcACAACTGTGTTTGCCAAAGGGTTCTATGGTACTGATATAGCAAATAGCATTGGTCTTGTAAATGCTGGGCAGTATCTTCAGGAGAAGTATGGGGGTGGAGTTTTCCCAATCTTATATATATGGGGTATTGGGTTATTAGCAGCCGGCCAAAGTAGCACCATCACTGGCACTTATGCTGGACAATTTATCATGGGGGGTTTCCTAAATTTAAGGTTGAAAAAATGGGTGAGGGCATTAATTACACGGAGTTTTGCAATAATCCCAACCATGATAGTTGCTCTTGTCTTTGATACCACAGAGGACTCCTTAGATGTTCTAAACGAATGGCTTAATGTTCTCCAGTCAGTTCAAATCCCCTTTGCACTTATTCCTTTGCTTTGTTTGGTGTCAAAGGAGCAGTTAATGGGTACTTTCAAAATTGGCCCTGTCCTCAAGATTATTTCATGGTTTGTGGCTGCTTTGGTGATACTCATAAACGGCTATCTTTTGCTGGAATTCTTCTCCTCTGAAGTGAATGGAGCAGTATTTGCCACCATCGTGTGTACATTTACTGCTGGCTATGTTGCGTTCATACTTTACCTTGTTTCTCGAGCCATTACCTTCTCACCTTGGCAAAAATTTACACAAACAAAGACAATCACCAACACAGAGGATTGA 1605 0.4486 MISLAGATTHTIIHISLSSFSPISMSTQDHEQPLLRRDEPEATAYDSSEKVVVVGIGESDGDDSGQAPAFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAIGLLVQLLSARLGVATGRHLAELCREEYPTWARMVLWVMAELALIGADIQEVIGSAIAIRILSNGVMPLWAGVIITACDCFIFLFLENYGVRKLEAFFAVLIAIMALSFAWMFGEAKPNGVDVLLGLLIPKLSSRTIQQAVGVVGCIIMPHNVFLHSALVQSRQVDQSKKGRVQEALNYYSIESTAALVVSLVINIFVTTVFAKGFYGTDIANSIGLVNAGQYLQEKYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSFAIIPTMIVALVFDTTEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQLMGTFKIGPVLKIISWFVAALVILINGYLLLEFFSSEVNGAVFATIVCTFTAGYVAFILYLVSRAITFSPWQKFTQTKTITNTED 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1712 534 Hamap Divalent metal cation transporter MntH [mntH]. 61 483 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 154 180 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 184 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 209 230 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 258 281 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 365 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 393 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PRINTS Natural resistance-associated macrophage protein signature 427 446 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 32 533 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 Pfam Natural resistance-associated macrophage protein 96 457 IPR001046 GO:0016020|GO:0030001|GO:0046873
Sto11g1712 534 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 32 533 - -
Sto11g1712 534 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 73 451 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1712 Sto-Chr11 15965778 15969816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1712 28 520 Inorganic Solute Cotransporters AT2G23150 79.678 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1712 K21398 - gmx:100807811 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3626 6 41440679 41443909 Sto11g1712 11 15965778 15969816 CCT