Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1704 ATGGCTTGGCGTAGCGGATCTCTTTCAAGGTCCCTATTCTCCGCCGCCAGAAGCATTCCAAGTCGTTCCTCTGCGCCGTCTCTCCCTCGCCTCCGCCgcccttcttcatcatcatcaccacttCGTTCCAACCTCCTCGACGCTCGCCGCCCCTTCAATGCGGTCCCTCGGACTATGGGCCAATTAGGGTGCACGCAGTCTCTCCTGCCGCTGCACAGCGTTGTTGCCTCCGCTCGCCTTACTTCCCACGTCTCTGTTGAATCTCGCGCTTGCTGCGAGTTGTCTCAGGGGTGCAGTATGGGAGCCTATAACTGCAGAATGGGGTTAAATCCCTTGTTGACTGGGGGAATTGGGACAAAAGAGGAACAGGAAGAAGCATCAGTATCAATATCAATGAAGCAGCAAGAAGTAGAAGGTGGATCATCAGAGACAGAGAACATAGGCAGTGAATGGTTGAGTTTAGGACTAAAGGGATCATCAGAAATGGGCCAATCTCAATTTCAATCTCAATCTCAAGCATCCTCAAAACCATTCcagaatcatcatcatcatcacaagGTATTCTCTTGCAATTTCTGTATGAGAAAGTTTTACAGCTCACAGGCATTAGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGGAGAAGCAAGAAGGTATCAATCACAcagggtgatgatgatgatgatggcttCAAGGTCACCATTGGGTGTGCAGCCACACTCACTTGTGCATAAGGCAAGCAGAGAAGAAGGGTCAGCCATGGTGGCTCGATTCAGTGATGTGAATTCTGGGTTTCATCAAATTGGATATCGGACGCCATTTgtggtagaagaagaagaagaacaagcttTGGATATGACTTGGCCAGGAAGCTTTAGGGTGGATTTGCCAAAGCAAGAATcagatataaataataagattGACTTAGATCTTCGCTTATGA 945 0.4317 MAWRSGSLSRSLFSAARSIPSRSSAPSLPRLRRPSSSSSPLRSNLLDARRPFNAVPRTMGQLGCTQSLLPLHSVVASARLTSHVSVESRACCELSQGCSMGAYNCRMGLNPLLTGGIGTKEEQEEASVSISMKQQEVEGGSSETENIGSEWLSLGLKGSSEMGQSQFQSQSQASSKPFQNHHHHHKVFSCNFCMRKFYSSQALGGHQNAHKRERGEARRYQSHRVMMMMMASRSPLGVQPHSLVHKASREEGSAMVARFSDVNSGFHQIGYRTPFVVEEEEEQALDMTWPGSFRVDLPKQESDINNKIDLDLRL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1704 314 PANTHER ZINC FINGER PROTEIN 4-LIKE 130 314 - -
Sto11g1704 314 MobiDBLite consensus disorder prediction 20 44 - -
Sto11g1704 314 ProSiteProfiles Zinc finger C2H2 type domain profile. 188 215 IPR013087 -
Sto11g1704 314 Gene3D Classic Zinc Finger 159 235 - -
Sto11g1704 314 PANTHER ZINC FINGER PROTEIN 4-LIKE 130 314 - -
Sto11g1704 314 MobiDBLite consensus disorder prediction 20 45 - -
Sto11g1704 314 ProSitePatterns Zinc finger C2H2 type domain signature. 190 210 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1704 Sto-Chr11 15874993 15881612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1704 186 294 C2H2 Transcription Factor Family AT1G66140 37.589 1.98e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1704 - - ccaj:109809498 185.267