Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1693 ATGGATCGGATCAAGGGCCCATGGAGCCCCGAAGAGGACGAGGCGTTGCAGAAGCTCGTAGAGAAACACGGGCCACGGAATTGGTCATTGATCAGCAAGTCAATCCCGGGTCGCTCCGGCAAGTCGTGCCGGCTCCGATGGTGCAATCAGCTCTCACCTCAGGTGGAGCACCGAGCCTTTACGCCCGAAGAGGATGAGACTATTATCAGGGCCCATGCCCGGTTCGGCAACAAATGGGCCACGATAGCCCGACTTCTCTCGGGTCGAACCGATAACGCCATCAAGAACCACTGGAACTCCACTTTGAAACGCAAGTGTGCGTCCATGATGATTTTCAGTCCCCAGCCGTTGAAGAGATCGGTGAGTGCCGGCGCCGCTATGCCGGTATCCACCGGATTCTACATGAATCCGTCGATGTCGACGCCGGGTAGCCCGTCCGGATCTGACGTCAGCGATTCCAGTGCCCCGGTGGCGTCTTCCTCTCATGTCTACCGTCCGGTGGCGAGAACCGGCGGAGTTCTACCTCCCGTAGAAACGACGTCGTCTTCGAATGATCCTCCTACTTCATTGTCCCTATCGCTTCCTGGTGTGGATTCCTCCGAAGTCTCGAATCGAGCTTCGGAGTCAACACATGCCGCTCCTCCGCTGACGAACACTACCATGCATTTCTTATCGGGAATGGCTTCAGTGGCTCCGGCGGCCAATCAGAATGGATTTGCGCCGTTCAATTTCAGTGCAGAGTTTCTAGGTGTGATGCAGGAGATGATAAGAAAGGAGGTGAGAAGTTATATGGCGGGATTGGAGCAGCAGAATGCGATGTGTTTTCAAGAAGCTGATGGATTTAGGAACGCTACGGTGAAGCGTATTGGGATTAGCAGGATCGATTCGTAA 891 0.5488 MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMIFSPQPLKRSVSAGAAMPVSTGFYMNPSMSTPGSPSGSDVSDSSAPVASSSHVYRPVARTGGVLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRASESTHAAPPLTNTTMHFLSGMASVAPAANQNGFAPFNFSAEFLGVMQEMIRKEVRSYMAGLEQQNAMCFQEADGFRNATVKRIGISRIDS 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1693 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 106 IPR017930 -
Sto11g1693 296 CDD SANT 7 49 IPR001005 -
Sto11g1693 296 Gene3D - 4 56 - -
Sto11g1693 296 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 2 216 - -
Sto11g1693 296 SMART sant 4 53 IPR001005 -
Sto11g1693 296 SMART sant 56 104 IPR001005 -
Sto11g1693 296 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Sto11g1693 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 55 IPR017930 -
Sto11g1693 296 Pfam Myb-like DNA-binding domain 8 66 - -
Sto11g1693 296 CDD SANT 59 102 IPR001005 -
Sto11g1693 296 PANTHER MYB PROTEIN-RELATED 2 216 - -
Sto11g1693 296 MobiDBLite consensus disorder prediction 140 160 - -
Sto11g1693 296 Gene3D - 58 120 - -
Sto11g1693 296 MobiDBLite consensus disorder prediction 140 217 - -
Sto11g1693 296 MobiDBLite consensus disorder prediction 175 217 - -
Sto11g1693 296 ProSiteProfiles Myb-like domain profile. 1 51 IPR001005 -
Sto11g1693 296 SUPERFAMILY Homeodomain-like 2 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1693 Sto-Chr11 15778048 15779007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1693 1 295 MYB Transcription Factor Family AT4G37260 51.220 4.69e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto11g1693 Myb_DNA-bind_6 4.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1693 K09422 - gmx:780556 416.772