Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1689 ATGAGCTTTTCAAGTATTCCTCTCATCCCTTTATGGTGGAGAATTCTCAcactccttcttcttcatcttcttctccttcatgttAATCCATGCTTTAGCCTAAGCAGAGATGGCATTCTCTTGCTTTCTTTTAAATACTCTGTTTTGAGTGACCCTCTGTGCTTGCTCGAAACCTGGAATGACAGTGACGACACTCCTTGTTCCTGGAATGGAGTTTCATGCGAAACCACATTTGATTATTCAAATAATTCTTCTCAGAATCAAGTGGTTGTTGGGTTGTCTCTTCCCAATTCTCAGCTTCTGGGTTCCCTTCCTTATGATCTTGGTTTCTTACAGAATCTCCAAAGTCTCGACCTTTCTAATAATTCCTTAAATGGGTCTCTTCCTTCTTCACTATTCCAAGCTTCCAACCTTCGGTTTCTTAATCTTTCCAACAATTTGATCTCCGGGGAGATTCCAGATTCCATAGTACAGCTCAGGAATCTTCGGTTTCTTAACCTTTCTGATAACACCTTGGCGGGAAAACTACCCACTAATTTAGCGAATATGCAGAATCTAACTGTCGTGTCTCTGAGGAATAATTACTTGTCGGGTAGTCTTCCTAGTGGGTTTCGAACGTTACAGTCTCTAGATCTGTCTTCGAATTTGTTGAACGGATCTCTGCCTCGGGATTTCGGTGGGGACAGTTTAGCATACTTGAACATCTCGTTCAACAAAATTTCCGGGAAAATCCCACCGGAATTTCCCGAGAAAATCCCGGAAAACGCCACCGTTGACCTCTCCTTCAACGACTTCGCCGGCGAAATCCCACATTCCTctgttttcaaaaatcaaaacctTACGACGTCGTTTTCTGGGAATCCTCATTTGTGCCTCAAACCATGTCCTATGGCTATTATTCCTTCTTCTTCGCCTTcgccttctccttctccttctccttcacccACATCTCCTCCTGCATTCGCTGCAATTCCGAAGTCTCTAGACTCTCCCCCGCCAAATGGGCCATTTTcgaaaaaaaccaaaaatagtGGGCTTAGAAGAGGAACAATTATAGGAATCATAATCGGAGACACCATAGGAATTGCAATAGTagctttgattttcttgtacgTGTACAatttgaagaggaagaagaagaacaccACCGATTGGTCAACATCGACAACGACGTCGTTTGAATCAAGAGGTTTCAAAAAGTGGTCGTGTCTtcgaaaaagagaagaaaaagaagaagaagacgagtcatcatcatcatcagaagCCACAAGCTATTGTGAGAGTGAAGTGGAAGGAAAGCAGGGGCATATTGGTAAATTGGTGAGCTTAGATGGTGAAAAGGAATTGGAGGTAGAGACGTTGCTGAAGGCGTCGGCTTACATTTTGGGAGCCACCGGTTCGAGCATAATGTACAAGGCCGTGCTGGAAGACGGGTCGGCGCTGGCGGTTCGGAGGATCGGGGAGAGTGGGGTGGAGCGGTTCAAGGAGTTCGAGAACCAGGTTCGAGCCGTGGCGAAATTGGTGCACCCAAATTTGGTTCGGGTTCGAGGGTTCTATTGGGGAAATGACGAGAAGCTCATCATCTATGACTTCGTTCCTAATGGTAGTCTCGCCAATGTTCGATACAGAAAAGTGGGTTCCTCCCCTTCCCATCTGCCATGGGAGATCAGGCTCAAGATTGCCAGAGGGGTCGCACGTGGCCTCTCCTACCTCCACGACAAGAAGCACGTGCACGCCAATCTCAAGCCCACCAACATTCTCTTGGGCACTGACATGGAGCCCAAGATTGGGGACTTCGGGCTCGAGAAGATCGTTACGGGGGACGCTTCTTATAAGCCCGGCGGTTCCGCGCGTATATTCGGGAGCAAGAGATCCACTGCCTCACGTGATAGCTTCCAAGACGTTGTCACCTTTGGGCCCAgtccaagcccaagcccaagctCAATCGGAGGTGTGTCTCCTTACCATGCACCCGAGTCGCTCAGGAACCTCAAGCCTCACCCGAAGTGGGACGTCTACTCGTTTGGGGTCATGTTTCTGGAGCTCCTCACGGGGAAGATTGTGGTTTTGGATGAGATGGGCCCTGGGCTTTTGATTGAGGACAAGAATCGGGCCTTGAGGATGGCTGACGTGGCAATCCGTGCTGACATGGAGGGTAAAGAGGAGGCCTTGTTAGGTTACTTCAAGTTAGGGTATAGTTGTGTATCCAGCGTCCCGCAGAAAAGGCCGTCGATGAAAGAAGTGATACAAACGCTTGATAAAATCGcatcctcctcttcttcctaCTCATATTATTATGGTCACTGA 2307 0.4304 MSFSSIPLIPLWWRILTLLLLHLLLLHVNPCFSLSRDGILLLSFKYSVLSDPLCLLETWNDSDDTPCSWNGVSCETTFDYSNNSSQNQVVVGLSLPNSQLLGSLPYDLGFLQNLQSLDLSNNSLNGSLPSSLFQASNLRFLNLSNNLISGEIPDSIVQLRNLRFLNLSDNTLAGKLPTNLANMQNLTVVSLRNNYLSGSLPSGFRTLQSLDLSSNLLNGSLPRDFGGDSLAYLNISFNKISGKIPPEFPEKIPENATVDLSFNDFAGEIPHSSVFKNQNLTTSFSGNPHLCLKPCPMAIIPSSSPSPSPSPSPSPTSPPAFAAIPKSLDSPPPNGPFSKKTKNSGLRRGTIIGIIIGDTIGIAIVALIFLYVYNLKRKKKNTTDWSTSTTTSFESRGFKKWSCLRKREEKEEEDESSSSSEATSYCESEVEGKQGHIGKLVSLDGEKELEVETLLKASAYILGATGSSIMYKAVLEDGSALAVRRIGESGVERFKEFENQVRAVAKLVHPNLVRVRGFYWGNDEKLIIYDFVPNGSLANVRYRKVGSSPSHLPWEIRLKIARGVARGLSYLHDKKHVHANLKPTNILLGTDMEPKIGDFGLEKIVTGDASYKPGGSARIFGSKRSTASRDSFQDVVTFGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDEMGPGLLIEDKNRALRMADVAIRADMEGKEEALLGYFKLGYSCVSSVPQKRPSMKEVIQTLDKIASSSSSYSYYYGH 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1689 768 Gene3D Transferase(Phosphotransferase) domain 1 532 764 - -
Sto11g1689 768 MobiDBLite consensus disorder prediction 302 343 - -
Sto11g1689 768 MobiDBLite consensus disorder prediction 407 426 - -
Sto11g1689 768 SMART LRR_typ_2 111 135 IPR003591 -
Sto11g1689 768 SMART LRR_typ_2 204 227 IPR003591 -
Sto11g1689 768 SMART LRR_typ_2 159 183 IPR003591 -
Sto11g1689 768 Gene3D Ribonuclease Inhibitor 204 299 IPR032675 -
Sto11g1689 768 SUPERFAMILY Protein kinase-like (PK-like) 461 752 IPR011009 -
Sto11g1689 768 Gene3D Ribonuclease Inhibitor 35 203 IPR032675 -
Sto11g1689 768 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Sto11g1689 768 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 20 758 - -
Sto11g1689 768 PANTHER BNAC07G16060D PROTEIN 20 758 - -
Sto11g1689 768 Gene3D Phosphorylase Kinase; domain 1 433 531 - -
Sto11g1689 768 ProSiteProfiles Protein kinase domain profile. 456 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1689 768 ProSiteProfiles Leucine-rich repeat profile. 137 159 IPR001611 GO:0005515
Sto11g1689 768 ProSiteProfiles Leucine-rich repeat profile. 113 135 IPR001611 GO:0005515
Sto11g1689 768 MobiDBLite consensus disorder prediction 302 332 - -
Sto11g1689 768 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Sto11g1689 768 PRINTS Leucine-rich repeat signature 114 127 - -
Sto11g1689 768 PRINTS Leucine-rich repeat signature 159 172 - -
Sto11g1689 768 Pfam Protein kinase domain 462 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1689 768 SUPERFAMILY L domain-like 37 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1689 Sto-Chr11 15745886 15749323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1689 33 768 Receptor kinase-like Gene Family AT4G37250 59.583 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sto11g1689 Pkinase 2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1689 - - gmx:100784503 935.25