Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1683 ATGAAGGGCTGGGTTATCATAAACCTTAGATTAAAGAACATGTTGCTGAGATCAACTAAGATGGTTGCTGTTGATTGTGAAATGGTTCTTTGTGAAGATGGGACTGATGCAGTTGTGAAAGTCTGTGTGGTTGACCGCAATTTGGAGGTCAAACTAGATAAACTTGTACGCCCTTACAAAAAAATTGTCGACTACAGAACAGAGATTACTGGTGTCTCTGCTCAAGATCTAGAGGGAATTACTTGTTCATTGGCTGATGTACAGAAATCCATGAAGAAGTTGTTGTCGAATGGAACAATATTAGTGGGACACAGTTTACATAATGATCTACGTGTGCTGAAGTTAGATTATATTAGAGTGATTGACACTTCATATATCTTCCTACCATTGGATGGACCTATTCACAAGAGACCTTCTTTGAATAATCTGTTATTGGGTTATCCGGTTCGGGAAATTGGTGCCCCACATAATTGTCTAGATGATGCAACTGCAGCAATGAAACTTGTTCTTGCCAAGATAAAGCACGGTGTTGATAATGATGACATTGCAATTCCTCTGATTCAAGAGCCCGTTCCTGAAAGTCAGTTGGCAAAGCTGCTGCTTCACAGGATATCAACTAGTGTTAAGATTGAAGAACTACATGAAGTTGTTCCTGGGAGATTCACATTAGAATTGAAGCCTCCTAAAGGAGACAAATATTCTGCTTTTGCCATCTTTAAGAATCCCCAAGAGGCCTATGATGCTTTTGAAGAGGTCCAAGGTAGCCAAGATAAGGATTCATGTGGACGTTCACAGAAGCTTGTCACATTTCAGCTCAGTTCAGGTATGACTAGCAGTCTGTATGTTAGGAAAATGGCACCTGATGACCCCCTTAAACTGAATCCATCAAAGAGAGCTTTAGAAGTGGCGGAGACTAATGTTTTTAAGAAAGCAAGGATGGATcctgaaagagaagaagaggatgCCGAGACTAACTCAAATATGTGTGAAACCCACTTGAAGGAGATTGAAGCACTTAATCAACGACTCAAACAAAGTGATTTGGAGATTGAAAATCTGAGACAGCAATTGAAACAAAACGAATCGGAGATTGAATCACTGAGGCAACAATTGAAACAAGATGTGGAGGTTGAATCTCTAAGGCAACAATTGAAACAAAAGGATTACGAAATCAACGTGTTGAATAAAATGGTAGCCTCCTTGAATATGAAACAGAAGAGATCAGTCACAACACGTTAA 1239 0.3882 MKGWVIINLRLKNMLLRSTKMVAVDCEMVLCEDGTDAVVKVCVVDRNLEVKLDKLVRPYKKIVDYRTEITGVSAQDLEGITCSLADVQKSMKKLLSNGTILVGHSLHNDLRVLKLDYIRVIDTSYIFLPLDGPIHKRPSLNNLLLGYPVREIGAPHNCLDDATAAMKLVLAKIKHGVDNDDIAIPLIQEPVPESQLAKLLLHRISTSVKIEELHEVVPGRFTLELKPPKGDKYSAFAIFKNPQEAYDAFEEVQGSQDKDSCGRSQKLVTFQLSSGMTSSLYVRKMAPDDPLKLNPSKRALEVAETNVFKKARMDPEREEEDAETNSNMCETHLKEIEALNQRLKQSDLEIENLRQQLKQNESEIESLRQQLKQDVEVESLRQQLKQKDYEINVLNKMVASLNMKQKRSVTTR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1683 412 SMART exoiiiendus 20 178 IPR013520 -
Sto11g1683 412 Coils Coil 329 397 - -
Sto11g1683 412 SUPERFAMILY Ribonuclease H-like 21 173 IPR012337 -
Sto11g1683 412 Gene3D - 16 182 IPR036397 GO:0003676
Sto11g1683 412 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 13 299 - -
Sto11g1683 412 CDD REX1_like 22 170 IPR034922 -
Sto11g1683 412 Pfam Exonuclease 22 168 IPR013520 -
Sto11g1683 412 PANTHER SMALL RNA DEGRADING NUCLEASE 2 13 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1683 Sto-Chr11 15703545 15705991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1683 20 168 C2H2 Transcription Factor Family AT2G48100 33.742 8.22e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1683 K14570 - gmx:100785565 461.84