Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1678 ATGGCCGTGGAGCTCATGATGGGTTTCAAGAGTGATCCCACTTTCACAAAATCCAAAACCGAAGAAAATGCGGTTCAAGAAGCTGCCTCTGGCTTAGAGAGCATCGAGAAGCTCATCAGATTGCTTTCCCAGTCCCACACTTCATCTTCCAATTCCTCCTCCATGGACATCCACCACGATTACAAAACCGTCGCGGACGTCGCCGTTTCCAAGTTCAAGAAGGTCATCTCGCTGCTCGGCCGAACCCGAACCGGCCACGCCCGGTTCCGACGAGCCCCCGTGCCCAATCAGAACCATACGACGACGCCGTCTAAGCAGATCACTCCCCAGAAAGAATATTCCAATAATTTCGCCTTCTCCTCCATTTCTTCTCTCACCGGCGATTCCGATCATCGTCATCACAACCGACCGGCGTCATCGTCGCCTGCGACAACTACTTTTCAGATCACCAATCTGCCTCAGGTGCCGCCGGCGGCGTCGTTGAAGAGGAAGTGTAGCTCTGAGAACTTGGGTTCTGGCAAGTGCGGTAGCTCTTCTGGTCGCTGCCATTGTTCCAAAAAAAGAAAAACGAGGTTGAAGAGGGTAGTGAGGGTGCCTGCTATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCTTGGAGGAAGTACGGACAGAAACCCATTAAAGGATCCCCTCATCCAagGGGATATTACAAGTGTAGCAGCGTGAGAGGGTGTCCGGCAAGGAAACATGTAGAGAGAGCTATGGATGATGCGTCGATGCTAGTAGTGACATATGAAGGCGAGCATAATCACTCTTTTTCTGCGTCTGATACTACTAATCTTATCCTAGAATCCtcttaa 849 0.5006 MAVELMMGFKSDPTFTKSKTEENAVQEAASGLESIEKLIRLLSQSHTSSSNSSSMDIHHDYKTVADVAVSKFKKVISLLGRTRTGHARFRRAPVPNQNHTTTPSKQITPQKEYSNNFAFSSISSLTGDSDHRHHNRPASSSPATTTFQITNLPQVPPAASLKRKCSSENLGSGKCGSSSGRCHCSKKRKTRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAMDDASMLVVTYEGEHNHSFSASDTTNLILESS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1678 282 MobiDBLite consensus disorder prediction 93 144 - -
Sto11g1678 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 100 IPR044810 GO:0003700
Sto11g1678 282 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 112 282 IPR044810 GO:0003700
Sto11g1678 282 SUPERFAMILY WRKY DNA-binding domain 206 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sto11g1678 282 Pfam Plant zinc cluster domain 162 207 IPR018872 -
Sto11g1678 282 MobiDBLite consensus disorder prediction 94 126 - -
Sto11g1678 282 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 112 282 - -
Sto11g1678 282 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 16 100 - -
Sto11g1678 282 ProSiteProfiles WRKY domain profile. 204 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g1678 282 SMART WRKY_cls 209 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g1678 282 Pfam WRKY DNA -binding domain 211 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sto11g1678 282 Gene3D WRKY domain 194 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1678 Sto-Chr11 15663028 15664124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1678 21 267 WRKY Transcription Factor Family AT2G24570 42.623 1.61e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sto11g1678 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1678 - - gmx:100804089 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1678 11 15663028 15664124 Sto6g3661 6 41720837 41722132 CCT