Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1674 ATGGAAGGCGAAGGAAGAGACAGAGAGATGATCAGCGCAGGCAGAGACGGAGAGAGAAGGTACAAGGGAATTCGCATGAGGAAGTGGGGAAAGTGGGTCGCCGAAATTCGGGAACCCAATAAGCGCTCTCGAATTTGGCTCGGCTCCTACTCCACCCCCGTCGCCGCCGCCAGAGCCTACGACACCGCCGTTTTCTACCTCAGGGGACCTTCCGCTCGCCTCAATTTCCCCGACCTTCTCGCCGGTGAACCCCGCGCCGCCGCTCCCGGCGCCGATTTGTCCGCCGCTTCGATTCGCAAGAAAGCCACGGAAGTCGGCGCCAGGGTCGATGCCCTCCAAGCCGCCGCCCTCCACCACCACCAGAATCATCACCGTGCTGCTGCGGCGGAGGCGGCGTCGCCCGAGCTCATGCCACGCGGCGCAGGAGAGTTCGCGGAGCGGGTTGACCTCAATAAGATACCCGAACCCGAGAATCCGGAGTATTTTACAGAACAAATTTTGATGCTGTGA 510 0.6118 MEGEGRDREMISAGRDGERRYKGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSARLNFPDLLAGEPRAAAPGADLSAASIRKKATEVGARVDALQAAALHHHQNHHRAAAAEAASPELMPRGAGEFAERVDLNKIPEPENPEYFTEQILML 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1674 169 Gene3D AP2/ERF domain 19 78 IPR036955 GO:0003700|GO:0006355
Sto11g1674 169 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Sto11g1674 169 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Sto11g1674 169 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Sto11g1674 169 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Sto11g1674 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 5 158 - -
Sto11g1674 169 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Sto11g1674 169 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Sto11g1674 169 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Sto11g1674 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-10 5 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1674 Sto-Chr11 15616193 15616829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1674 21 167 AP2-EREBP Transcription Factor Family AT2G23340 61.074 2.34e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto11g1674 AP2 1.1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1674 K09286 - gmx:100784157 190.274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3667 6 41769475 41773740 Sto11g1674 11 15616193 15616829 CCT