Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1672 ATGTGGGATCTCAATGTGTGGCCCGATCAGCGAAACGACGTCGGCGAATCGGGAAGCTGTTCGAATTCCCCGAACGAAGAGAAAGGGAAGCGGGTCGGATCCGTGTCGAATTCAAGCTCATCGGCGGTggaagaaggggagggaagCAGGGGAGCACTCTCGAAGAAGCAGCGAAGCAGTAAGATATTCGGGTTCAGCGTGATCCACGACGAGTACTCCGTTAATAGCACCGATGAGGTGGACCCACCCCTCGTAATTACCCGGCAGTTCATGCCCGTGGAGGAGGCCAGCGCCTCGGGCTCGGGCTCGGGCTTCCCGCGGGCTCAGTGGGTGGGCCTGAAATTCCGGGAAACAGAAGGGGGAGGTGGAGGAGGAGAAACCTCAGTGGAAGTAGTTTCGTCGTCGTCGCAGGCGATGGTGAAGAAGAGTCGGCGAGGGCCGAGGTCAAGGAGCTCACAGTATAGAGGAGTTACCTTTTACAGAAGAACAGGTCGATGGGAGTCTCATATATGGGATTGTGGGAAACAAGTCTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCGATTAAATTCCGGGGAGTAGAAGCGGACATTAATTTCAACATTGAAGATTATGAACAAGACTTGAAAcagATGAGTAATCTGACGAAGGAAGAGTTTGTGCACGTACTTCGGCGACAAAGCACTGGGTTTCCGAGAGGAAGCTCTAAATACAGAGGTGTTACATTGCACAAGTGTGGTAGATGGGAGGCTCGAATGGGCCAATTCTTAggcaaaaaGGCTTATGACAAAGCAGCACTAAAATGCAACGGCAAAGACGCCGTCACCAATTTTGATCCCAGCATCTATGAGAACGAGCTTAATTCtgAATCATCATCAGGCAACGCTGATCACAATCTGGATCTAAGTCTGgggaattccaattccaatttgaATCCGCGGAATAATCGATTAAAGCCTAAGGTACAAGAACAAAGCAGCAGAAACATAAATCTGCTAAGCCAAACCCACCTAGTTCAATCTGCGCCCACAGGACAGCCTCAAATTCTTCACAATTTTGCACATTTTCAGCAGCCAAATTTTCGAGTTAGTAACAAGGGTAATATTGGAAGCGAAGTTTCAGTGTGGAGTATGAGGGATGAAAATAGAAGTTCTGGTGCAGCATCATCAGGATTCTCGTCATCACAGCAGATAAGAACTGCACACCATGCTTGGCTACACAAAAATGGGTTCCACACTACACTCATGAGACCCTCCTGA 1284 0.4743 MWDLNVWPDQRNDVGESGSCSNSPNEEKGKRVGSVSNSSSSAVEEGEGSRGALSKKQRSSKIFGFSVIHDEYSVNSTDEVDPPLVITRQFMPVEEASASGSGSGFPRAQWVGLKFRETEGGGGGGETSVEVVSSSSQAMVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEQDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAALKCNGKDAVTNFDPSIYENELNSESSSGNADHNLDLSLGNSNSNLNPRNNRLKPKVQEQSSRNINLLSQTHLVQSAPTGQPQILHNFAHFQQPNFRVSNKGNIGSEVSVWSMRDENRSSGAASSGFSSSQQIRTAHHAWLHKNGFHTTLMRPS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1672 427 MobiDBLite consensus disorder prediction 12 45 - -
Sto11g1672 427 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 396 - -
Sto11g1672 427 MobiDBLite consensus disorder prediction 1 55 - -
Sto11g1672 427 SUPERFAMILY DNA-binding domain 244 289 IPR016177 GO:0003677
Sto11g1672 427 ProSiteProfiles AP2/ERF domain profile. 153 209 IPR001471 GO:0003700|GO:0006355
Sto11g1672 427 CDD AP2 244 289 IPR001471 GO:0003700|GO:0006355
Sto11g1672 427 MobiDBLite consensus disorder prediction 294 334 - -
Sto11g1672 427 PANTHER FLORAL HOMEOTIC PROTEIN APETALA 2 1 396 - -
Sto11g1672 427 SUPERFAMILY DNA-binding domain 152 210 IPR016177 GO:0003677
Sto11g1672 427 Pfam AP2 domain 153 201 IPR001471 GO:0003700|GO:0006355
Sto11g1672 427 CDD AP2 153 210 IPR001471 GO:0003700|GO:0006355
Sto11g1672 427 Gene3D AP2/ERF domain 152 211 IPR036955 GO:0003700|GO:0006355
Sto11g1672 427 Gene3D AP2/ERF domain 244 288 IPR036955 GO:0003700|GO:0006355
Sto11g1672 427 SMART rav1_2 245 293 IPR001471 GO:0003700|GO:0006355
Sto11g1672 427 SMART rav1_2 153 215 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1672 Sto-Chr11 15596507 15598712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1672 1 427 AP2-EREBP Transcription Factor Family AT4G36920 53.780 2.60e-120 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto11g1672 AP2 5.9e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1672 K09284 - gmx:100786333 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3671 6 41786855 41789479 Sto11g1672 11 15596507 15598712 CCT