Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1660 ATGGATTGGGTTCGAGGACACTTGATTGGAAGAGGAAGTTTCGCCGCCGTTCACTTGGCAATCCCCACAAGCGCTTCTTCCTCTCTGATTTCTTCTCCCACCGCCGTCAAATCCGCCGCAatttccacctcttcttcccTCAAGAACGAGAAGCACGTGCTGGATTGCCTTGGGTTTTGCCCCCACATCGTGACCTGTTTTGGCGATGGTTATAGCTTCGAGAATGGCGCTGAGTACTATAATTTGTTTCTCGAGTACGCCGCCCGCGGTAGCCTTGCGGATTATATCAAGGCTCGCGGCGGCGGCCGCCTGGTGGAGCCCGATGTGCGGCGGTACACGGCGTCGATTGTGAGAGGAATCAGGCATATTCACGCGAGGGGATTCGTGCACTGCGATATTAAGCTTCAGAACGTGCTTCTGTTCGAGAATGGCGACGTCAAAATCGCGGACTTGGGACTTGCGAGGAAAACAGAGGAATGTGGAAAACAGAGCAACGGAGAGAAGGCGTGCGAGTGGAGAGGAACTCCTCTGTTTATGTCGCCGGAATCGGTGAAGGACAACGTGTATGAATCTCCGGCGGATATTTGGGCTCTCGGCTGCGCGGTGGTGGAGATGGTCACCGGGAAACCCGCCTGGAAGAACAACCAAAATGGATCCAAATCGGAATCGAATGCGAATAACATGTGCTCGCTATTGCTTCGGATCGGTTTAGGAGAAGAATTACCGGCAATACCAGAAGAATTATCGGAAGAAGGGAAGGATTTCGTGAGGAAGTGTTTGGTGAAGGATCCCACGAAGAGATGGACGGCGGAGATGCTTTTGAAGCACCCATTCATCATCGGTGACGACTCTGTTTCGTCTGGAGAATGGACATCGCCGAGAAGTCACTTCGATTTTCCGGATTGGGTTTCGTGTACGCCGACGGCGGCGGCCTCTGTTCCGAGTTCGCCGGAGTCCGACGAATGGCGTGAATGGAAATTTGAAGCTTCGAGTTTATGTCCGGCGAGGGATCGACTCCGGCGACTGGTGACGGGTGAGAGACCCGATtggtgggaatgggaatgtggaAGTTGGGTTGGAGTTAGGTGA 1089 0.517 MDWVRGHLIGRGSFAAVHLAIPTSASSSLISSPTAVKSAAISTSSSLKNEKHVLDCLGFCPHIVTCFGDGYSFENGAEYYNLFLEYAARGSLADYIKARGGGRLVEPDVRRYTASIVRGIRHIHARGFVHCDIKLQNVLLFENGDVKIADLGLARKTEECGKQSNGEKACEWRGTPLFMSPESVKDNVYESPADIWALGCAVVEMVTGKPAWKNNQNGSKSESNANNMCSLLLRIGLGEELPAIPEELSEEGKDFVRKCLVKDPTKRWTAEMLLKHPFIIGDDSVSSGEWTSPRSHFDFPDWVSCTPTAAASVPSSPESDEWREWKFEASSLCPARDRLRRLVTGERPDWWEWECGSWVGVR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1660 362 ProSiteProfiles Protein kinase domain profile. 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1660 362 SMART serkin_6 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1660 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Sto11g1660 362 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 329 - -
Sto11g1660 362 SUPERFAMILY Protein kinase-like (PK-like) 3 317 IPR011009 -
Sto11g1660 362 ProSitePatterns Protein kinases ATP-binding region signature. 9 37 IPR017441 GO:0005524
Sto11g1660 362 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 329 - -
Sto11g1660 362 CDD STKc_MAPKKK 2 279 - -
Sto11g1660 362 Pfam Protein kinase domain 5 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto11g1660 362 Gene3D Transferase(Phosphotransferase) domain 1 2 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1660 Sto-Chr11 15507978 15509066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1660 1 362 MAP Kinase Kinase Kinase AT4G36950 50.954 1.20e-110 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sto11g1660 Pkinase 1.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1660 - - aprc:113858661 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto6g3692 6 41931635 41932666 Sto11g1660 11 15507978 15509066 CCT